Difference between revisions of "TSS:Hg 102649.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=101 |entrez_id=203245 |gc_percent=0.61194 |gene_alias=C9orf90|bA379C10.2 |gene_description=nuclear apoptosis inducing factor 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ600055:-24 BC021580:48 NM_197956:-96 AK122729:-96 ENST00000373078.4:-97 uc004bta.4:-97 AL833392:102 KJ905037:112 | ||
| + | |bA379C10.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=-24 | ||
|distance_to_tss=101 | |distance_to_tss=101 | ||
| + | |end=128067224 | ||
|entrez_id=203245 | |entrez_id=203245 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_197956 | |nearest_refseq=NM_197956 | ||
|nearest_unigene=Hs.373606 | |nearest_unigene=Hs.373606 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=128067213 | ||
| + | |strand=- | ||
|tata_box="89(TTCTTTAAAAAG,-,0.00)" | |tata_box="89(TTCTTTAAAAAG,-,0.00)" | ||
| + | |transcript_name=DQ600055 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102649.1 | |tss_id=hg_102649.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:35, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ600055 |
|---|---|
| Distance: | -24 |
| Num_trans: | 8 |
| All_trans: | DQ600055:-24 BC021580:48 NM_197956:-96 AK122729:-96 ENST00000373078.4:-97 uc004bta.4:-97 AL833392:102 KJ905037:112 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_197956 |
| Entrez ID: | 203245 |
| Nearest Unigene: | Hs.373606 |
| Nearest Refseq: | NM_197956 |
| Nearest Ensembl: | ENSG00000171169 |
| Gene Name: | NAIF1 |
| Gene Alias: | C9orf90 |
| Gene Description: | nuclear apoptosis inducing factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "89(TTCTTTAAAAAG,-,0.00)" |
