Difference between revisions of "TSS:Hg 102657.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=612 |entrez_id=80142 |gc_percent=0.78607 |gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 |gene_description=prostaglandin E synthas...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GBF-1= | ||
| + | |GBF1= | ||
| + | |PGES2= | ||
| + | |all_trans=ENST00000474124.5:-95 uc064wau.1:-95 BC009397:-117 ENST00000483625.5:-129 uc064wax.1:-129 ENST00000485510.5:-131 uc064waz.1:-131 BC009456:-135 ENST00000496594.5:-137 uc064waq.1:-137 KJ905547:-138 DQ891904:-138 DQ895090:-138 AB463194:-138 AM392565:-138 ENST00000449878.1:-144 uc064wav.1:-144 AK223520:-144 AK024100:-149 BC011613:-317 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=-95 | ||
|distance_to_tss=612 | |distance_to_tss=612 | ||
| + | |end=128127580 | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 | |gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 | ||
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
| − | |gene_name=PTGES2 | + | |gene_id=80142 |
| + | |gene_name=prostaglandin E synthase 2 | ||
| + | |gene_source=HGNC:17822 | ||
| + | |gene_symbol=PTGES2 | ||
| + | |gene_synonyms=FLJ14038 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17822 | ||
| + | |mPGES-2= | ||
|nearest_ensembl=ENSG00000148334 | |nearest_ensembl=ENSG00000148334 | ||
|nearest_promoter_id=NM_001256335 | |nearest_promoter_id=NM_001256335 | ||
|nearest_refseq=NM_025072 | |nearest_refseq=NM_025072 | ||
|nearest_unigene=Hs.495219 | |nearest_unigene=Hs.495219 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=128127571 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000474124.5 uc064wau.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102657.1 | |tss_id=hg_102657.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:35, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000474124.5 uc064wau.1 |
|---|---|
| Distance: | -95 |
| Num_trans: | 20 |
| All_trans: | ENST00000474124.5:-95 uc064wau.1:-95 BC009397:-117 ENST00000483625.5:-129 uc064wax.1:-129 ENST00000485510.5:-131 uc064waz.1:-131 BC009456:-135 ENST00000496594.5:-137 uc064waq.1:-137 KJ905547:-138 DQ891904:-138 DQ895090:-138 AB463194:-138 AM392565:-138 ENST00000449878.1:-144 uc064wav.1:-144 AK223520:-144 AK024100:-149 BC011613:-317 |
TATA-Box annotation
| Distance to TSS: | 612 |
|---|---|
| Nearest PromoterID: | NM_001256335 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
