Difference between revisions of "TSS:Hg 102663.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=45 |entrez_id=80142 |gc_percent=0.736318 |gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 |gene_description=prostaglandin E synthas...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GBF-1= | ||
| + | |GBF1= | ||
| + | |PGES2= | ||
| + | |all_trans=ENST00000476748.5:0 ENST00000497109.5:0 uc064waw.1:0 uc064way.1:0 AK301618:0 ENST00000338961.10:-11 ENST00000277462.9:-11 NM_198938:-11 NM_025072:-11 uc004bti.4:-11 uc004btk.5:-11 AK057049:-11 ENST00000617202.4:196 NM_001256335:196 uc031tff.2:196 ENST00000487063.5:238 uc064wat.1:238 ENST00000485237.1:270 uc064wba.1:270 BC011613:487 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
| + | |end=128128451 | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 | |gene_alias=C9orf15|GBF-1|GBF1|PGES2|mPGES-2 | ||
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
| − | |gene_name=PTGES2 | + | |gene_id=80142 |
| + | |gene_name=prostaglandin E synthase 2 | ||
| + | |gene_source=HGNC:17822 | ||
| + | |gene_symbol=PTGES2 | ||
| + | |gene_synonyms=FLJ14038 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17822 | ||
| + | |mPGES-2= | ||
|nearest_ensembl=ENSG00000148334 | |nearest_ensembl=ENSG00000148334 | ||
|nearest_promoter_id=NM_025072 | |nearest_promoter_id=NM_025072 | ||
|nearest_refseq=NM_025072 | |nearest_refseq=NM_025072 | ||
|nearest_unigene=Hs.495219 | |nearest_unigene=Hs.495219 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=128128383 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000476748.5 ENST00000497109.5 uc064waw.1 uc064way.1 AK301618 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102663.1 | |tss_id=hg_102663.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DWP1 | ||
}} | }} | ||
Revision as of 19:36, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000476748.5 ENST00000497109.5 uc064waw.1 uc064way.1 AK301618 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000476748.5:0 ENST00000497109.5:0 uc064waw.1:0 uc064way.1:0 AK301618:0 ENST00000338961.10:-11 ENST00000277462.9:-11 NM_198938:-11 NM_025072:-11 uc004bti.4:-11 uc004btk.5:-11 AK057049:-11 ENST00000617202.4:196 NM_001256335:196 uc031tff.2:196 ENST00000487063.5:238 uc064wat.1:238 ENST00000485237.1:270 uc064wba.1:270 BC011613:487 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_025072 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
