Difference between revisions of "TSS:Hg 102675.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=862 |entrez_id=25792 |gc_percent=0.626866 |gene_alias=LSFR1|NP94|ZNF356 |gene_description=CDKN1A interacting zinc finger protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NP94= | ||
| + | |ZNF356= | ||
| + | |all_trans=ENST00000415526.5:12 uc064wbr.1:12 AF234161:12 ENST00000491954.5:-101 uc064wcb.1:-101 AF159025:-122 ENST00000393608.5:-124 uc064wbo.1:-124 ENST00000498156.5:-125 uc064wcc.1:-125 ENST00000277465.8:-127 uc004btr.4:-127 BC004119:-127 ENST00000474442.1:255 uc064wce.1:255 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=12 | ||
|distance_to_tss=862 | |distance_to_tss=862 | ||
| + | |end=128190733 | ||
|entrez_id=25792 | |entrez_id=25792 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=LSFR1|NP94|ZNF356 | |gene_alias=LSFR1|NP94|ZNF356 | ||
|gene_description=CDKN1A interacting zinc finger protein 1 | |gene_description=CDKN1A interacting zinc finger protein 1 | ||
| − | |gene_name=CIZ1 | + | |gene_id=25792 |
| + | |gene_name=CDKN1A interacting zinc finger protein 1 | ||
| + | |gene_source=HGNC:16744 | ||
| + | |gene_symbol=CIZ1 | ||
| + | |gene_synonyms=LSFR1 ZNF356 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16744 | ||
|nearest_ensembl=ENSG00000148337 | |nearest_ensembl=ENSG00000148337 | ||
|nearest_promoter_id=NM_001131018 | |nearest_promoter_id=NM_001131018 | ||
|nearest_refseq=NM_012127 | |nearest_refseq=NM_012127 | ||
|nearest_unigene=Hs.212395 | |nearest_unigene=Hs.212395 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=128190721 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000415526.5 uc064wbr.1 AF234161 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102675.1 | |tss_id=hg_102675.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H0Y5D5 | ||
}} | }} | ||
Revision as of 19:36, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000415526.5 uc064wbr.1 AF234161 |
|---|---|
| Distance: | 12 |
| Num_trans: | 15 |
| All_trans: | ENST00000415526.5:12 uc064wbr.1:12 AF234161:12 ENST00000491954.5:-101 uc064wcb.1:-101 AF159025:-122 ENST00000393608.5:-124 uc064wbo.1:-124 ENST00000498156.5:-125 uc064wcc.1:-125 ENST00000277465.8:-127 uc004btr.4:-127 BC004119:-127 ENST00000474442.1:255 uc064wce.1:255 |
TATA-Box annotation
| Distance to TSS: | 862 |
|---|---|
| Nearest PromoterID: | NM_001131018 |
| Entrez ID: | 25792 |
| Nearest Unigene: | Hs.212395 |
| Nearest Refseq: | NM_012127 |
| Nearest Ensembl: | ENSG00000148337 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | LSFR1 |
| Gene Description: | CDKN1A interacting zinc finger protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
