Difference between revisions of "TSS:Hg 102688.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=-278 |entrez_id=100616335 |gc_percent=0.616915 |gene_alias=MIR2964A|hsa-mir-219b|mir-219b |gene_description=microRNA 219b |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AY882313:-304 LG005857:-304 LG053553:-304 LG051691:-365 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=-304 | ||
|distance_to_tss=-278 | |distance_to_tss=-278 | ||
| + | |end=128392349 | ||
|entrez_id=100616335 | |entrez_id=100616335 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 8: | Line 12: | ||
|gene_name=MIR219B | |gene_name=MIR219B | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hsa-mir-219b= | ||
| + | |mir-219b= | ||
|nearest_ensembl=ENSG00000283335 | |nearest_ensembl=ENSG00000283335 | ||
|nearest_promoter_id=NR_039815 | |nearest_promoter_id=NR_039815 | ||
|nearest_refseq=NR_039815 | |nearest_refseq=NR_039815 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=128392336 | ||
| + | |strand=- | ||
| + | |transcript_name=AY882313 LG005857 LG053553 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102688.1 | |tss_id=hg_102688.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY882313 LG005857 LG053553 |
|---|---|
| Distance: | -304 |
| Num_trans: | 4 |
| All_trans: | AY882313:-304 LG005857:-304 LG053553:-304 LG051691:-365 |
TATA-Box annotation
| Distance to TSS: | -278 |
|---|---|
| Nearest PromoterID: | NR_039815 |
| Entrez ID: | 100616335 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039815 |
| Nearest Ensembl: | ENSG00000283335 |
| Gene Name: | MIR219B |
| Gene Alias: | MIR2964A |
| Gene Description: | microRNA 219b |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
