Difference between revisions of "TSS:Hg 102692.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-788 |entrez_id=407003 |gc_percent=0.641791 |gene_alias=MIR219-2|MIRN219-2|hsa-mir-219a-2|mir-219a-2 |gene_description=microRNA...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MIRN219-2= | ||
| + | |all_trans=ENST00000608502.2:0 uc064wdx.1:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=-788 | |distance_to_tss=-788 | ||
| + | |end=128393510 | ||
|entrez_id=407003 | |entrez_id=407003 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=MIR219-2|MIRN219-2|hsa-mir-219a-2|mir-219a-2 | |gene_alias=MIR219-2|MIRN219-2|hsa-mir-219a-2|mir-219a-2 | ||
|gene_description=microRNA 219a-2 | |gene_description=microRNA 219a-2 | ||
| − | |gene_name=MIR219A2 | + | |gene_id=407003 |
| + | |gene_name=microRNA 219a-2 | ||
| + | |gene_source=HGNC:31598 | ||
| + | |gene_symbol=MIR219A2 | ||
| + | |gene_synonyms=hsa-mir-219-2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31598 | ||
| + | |hsa-mir-219a-2= | ||
| + | |mir-219a-2= | ||
|nearest_ensembl=ENSG00000207955 | |nearest_ensembl=ENSG00000207955 | ||
|nearest_promoter_id=NR_029837 | |nearest_promoter_id=NR_029837 | ||
|nearest_refseq=NR_029837 | |nearest_refseq=NR_029837 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=128393494 | ||
| + | |strand=- | ||
|tata_box="-33(GTCTTTAAGAGC,-,0.00),-32(TCTTTAAGAGCT,+,0.00)" | |tata_box="-33(GTCTTTAAGAGC,-,0.00),-32(TCTTTAAGAGCT,+,0.00)" | ||
| + | |transcript_name=ENST00000608502.2 uc064wdx.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102692.1 | |tss_id=hg_102692.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000608502.2 uc064wdx.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000608502.2:0 uc064wdx.1:0 |
TATA-Box annotation
| Distance to TSS: | -788 |
|---|---|
| Nearest PromoterID: | NR_029837 |
| Entrez ID: | 407003 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029837 |
| Nearest Ensembl: | ENSG00000207955 |
| Gene Name: | microRNA 219a-2 |
| Gene Alias: | MIR219-2 |
| Gene Description: | microRNA 219a-2 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GTCTTTAAGAGC,-,0.00),-32(TCTTTAAGAGCT,+,0.00)" |
