Difference between revisions of "TSS:Hg 102702.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=18 |entrez_id=84885 |gc_percent=0.756219 |gene_alias=DHHC-12|ZNF400 |gene_description=zinc finger DHHC-type containing 12 |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZNF400= | ||
| + | |all_trans=ENST00000372663.8:0 ENST00000372667.9:0 ENST00000467312.1:0 ENST00000452105.5:0 ENST00000406904.2:0 NM_001318016:0 NM_032799:0 NM_001318015:0 NM_001318020:0 NM_001318023:0 uc004bvy.4:0 uc064wgo.1:0 uc033dim.2:0 uc064wgp.1:0 uc064wgq.1:0 BC009280:0 BC048251:0 AK027430:0 AK075332:0 AK092843:0 AK315746:0 HQ448571:0 KJ903475:0 CU690564:0 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| + | |end=128724134 | ||
|entrez_id=84885 | |entrez_id=84885 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=DHHC-12|ZNF400 | |gene_alias=DHHC-12|ZNF400 | ||
|gene_description=zinc finger DHHC-type containing 12 | |gene_description=zinc finger DHHC-type containing 12 | ||
| − | |gene_name=ZDHHC12 | + | |gene_id=84885 |
| + | |gene_name=zinc finger DHHC-type containing 12 | ||
| + | |gene_source=HGNC:19159 | ||
| + | |gene_symbol=ZDHHC12 | ||
| + | |gene_synonyms=FLJ14524 ZNF400 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19159 | ||
|nearest_ensembl=ENSG00000160446 | |nearest_ensembl=ENSG00000160446 | ||
|nearest_promoter_id=NM_001318023 | |nearest_promoter_id=NM_001318023 | ||
|nearest_refseq=NM_032799 | |nearest_refseq=NM_032799 | ||
|nearest_unigene=Hs.133122 | |nearest_unigene=Hs.133122 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=128724088 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372663.8 ENST00000372667.9 ENST00000467312.1 ENST00000452105.5 ENST00000406904.2 NM_001318016 NM_032799 NM_001318015 NM_001318020 NM_001318023 uc004bvy.4 uc064wgo.1 uc033dim.2 uc064wgp.1 uc064wgq.1 BC009280 BC048251 AK027430 AK075332 AK092843 AK315746 HQ448571 KJ903475 CU690564 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102702.1 | |tss_id=hg_102702.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T266 Q5T269 Q96GR4 X6RBN4 | ||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000372663.8 ENST00000372667.9 ENST00000467312.1 ENST00000452105.5 ENST00000406904.2 NM_001318016 NM_032799 NM_001318015 NM_001318020 NM_001318023 uc004bvy.4 uc064wgo.1 uc033dim.2 uc064wgp.1 uc064wgq.1 BC009280 BC048251 AK027430 AK075332 AK092843 AK315746 HQ448571 KJ903475 CU690564 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000372663.8:0 ENST00000372667.9:0 ENST00000467312.1:0 ENST00000452105.5:0 ENST00000406904.2:0 NM_001318016:0 NM_032799:0 NM_001318015:0 NM_001318020:0 NM_001318023:0 uc004bvy.4:0 uc064wgo.1:0 uc033dim.2:0 uc064wgp.1:0 uc064wgq.1:0 BC009280:0 BC048251:0 AK027430:0 AK075332:0 AK092843:0 AK315746:0 HQ448571:0 KJ903475:0 CU690564:0 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001318023 |
| Entrez ID: | 84885 |
| Nearest Unigene: | Hs.133122 |
| Nearest Refseq: | NM_032799 |
| Nearest Ensembl: | ENSG00000160446 |
| Gene Name: | zinc finger DHHC-type containing 12 |
| Gene Alias: | DHHC-12 |
| Gene Description: | zinc finger DHHC-type containing 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
