Difference between revisions of "TSS:Hg 102703.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=3 |entrez_id=100506100 |gc_percent=0.656716 |gene_alias=- |gene_description=uncharacterized LOC100506100 |gene_name=LOC10050610...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001318016:333 NM_032799:333 NM_001318015:333 NM_001318020:333 NM_001318023:333 ENST00000467312.1:335 uc033dim.2:335 AK092843:335 AK315746:337 ENST00000372667.9:339 uc064wgo.1:339 AK027430:340 AK075332:340 ENST00000452105.5:341 uc064wgp.1:341 BC048251:352 ENST00000406904.2:353 uc064wgq.1:353 ENST00000372663.8:356 uc004bvy.4:356 BC009280:356 HQ448571:366 KJ903475:366 CU690564:369 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=333 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=128724469 | ||
|entrez_id=100506100 | |entrez_id=100506100 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100506100 | |gene_description=uncharacterized LOC100506100 | ||
| − | |gene_name= | + | |gene_id=84885 |
| + | |gene_name=zinc finger DHHC-type containing 12 | ||
| + | |gene_source=HGNC:19159 | ||
| + | |gene_symbol=ZDHHC12 | ||
| + | |gene_synonyms=FLJ14524 ZNF400 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:19159 | ||
|nearest_ensembl=ENSG00000223478 | |nearest_ensembl=ENSG00000223478 | ||
|nearest_promoter_id=NR_046240 | |nearest_promoter_id=NR_046240 | ||
|nearest_refseq=NR_046240 | |nearest_refseq=NR_046240 | ||
|nearest_unigene=Hs.62946 | |nearest_unigene=Hs.62946 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=128724461 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001318016 NM_032799 NM_001318015 NM_001318020 NM_001318023 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102703.1 | |tss_id=hg_102703.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96GR4 | ||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001318016 NM_032799 NM_001318015 NM_001318020 NM_001318023 |
|---|---|
| Distance: | 333 |
| Num_trans: | 24 |
| All_trans: | NM_001318016:333 NM_032799:333 NM_001318015:333 NM_001318020:333 NM_001318023:333 ENST00000467312.1:335 uc033dim.2:335 AK092843:335 AK315746:337 ENST00000372667.9:339 uc064wgo.1:339 AK027430:340 AK075332:340 ENST00000452105.5:341 uc064wgp.1:341 BC048251:352 ENST00000406904.2:353 uc064wgq.1:353 ENST00000372663.8:356 uc004bvy.4:356 BC009280:356 HQ448571:366 KJ903475:366 CU690564:369 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NR_046240 |
| Entrez ID: | 100506100 |
| Nearest Unigene: | Hs.62946 |
| Nearest Refseq: | NR_046240 |
| Nearest Ensembl: | ENSG00000223478 |
| Gene Name: | zinc finger DHHC-type containing 12 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100506100 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
