Difference between revisions of "TSS:Hg 102712.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=128 |entrez_id=883 |gc_percent=0.676617 |gene_alias=CCBL1|GTK|KAT1|KATI |gene_description=kynurenine aminotransferase 1 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GTK= | ||
| + | |KAT1= | ||
| + | |KATI= | ||
| + | |all_trans=ENST00000320665.10:0 ENST00000474824.1:0 uc004bwj.5:0 uc064whf.1:0 BC033685:0 AK297995:0 AK314427:0 BC022468:-61 ENST00000462722.5:-65 uc004bwi.5:-65 BC021262:-65 ENST00000302586.7:-82 uc004bwh.5:-82 AK291178:-98 ENST00000436267.6:-104 NM_001287390:-104 NR_109829:-104 NM_001122672:-104 NM_001122671:-104 NM_004059:-104 uc011mbl.3:-104 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=128 | |distance_to_tss=128 | ||
| + | |end=128881971 | ||
|entrez_id=883 | |entrez_id=883 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=CCBL1|GTK|KAT1|KATI | |gene_alias=CCBL1|GTK|KAT1|KATI | ||
|gene_description=kynurenine aminotransferase 1 | |gene_description=kynurenine aminotransferase 1 | ||
| − | |gene_name= | + | |gene_id=883 |
| + | |gene_name="cysteine conjugate-beta lyase, cytoplasmic" | ||
| + | |gene_source=HGNC:1564 | ||
| + | |gene_symbol=CCBL1 | ||
| + | |gene_synonyms=GTK KATI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1564 | ||
|nearest_ensembl=ENSG00000171097 | |nearest_ensembl=ENSG00000171097 | ||
|nearest_promoter_id=NM_001287390 | |nearest_promoter_id=NM_001287390 | ||
|nearest_refseq=NM_004059 | |nearest_refseq=NM_004059 | ||
|nearest_unigene=Hs.495250 | |nearest_unigene=Hs.495250 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=128881923 | ||
| + | |strand=- | ||
|tata_box="-25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00)" | |tata_box="-25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00)" | ||
| + | |transcript_name=ENST00000320665.10 ENST00000474824.1 uc004bwj.5 uc064whf.1 BC033685 AK297995 AK314427 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102712.1 | |tss_id=hg_102712.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q16773 | ||
}} | }} | ||
Revision as of 19:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000320665.10 ENST00000474824.1 uc004bwj.5 uc064whf.1 BC033685 AK297995 AK314427 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000320665.10:0 ENST00000474824.1:0 uc004bwj.5:0 uc064whf.1:0 BC033685:0 AK297995:0 AK314427:0 BC022468:-61 ENST00000462722.5:-65 uc004bwi.5:-65 BC021262:-65 ENST00000302586.7:-82 uc004bwh.5:-82 AK291178:-98 ENST00000436267.6:-104 NM_001287390:-104 NR_109829:-104 NM_001122672:-104 NM_001122671:-104 NM_004059:-104 uc011mbl.3:-104 |
TATA-Box annotation
| Distance to TSS: | 128 |
|---|---|
| Nearest PromoterID: | NM_001287390 |
| Entrez ID: | 883 |
| Nearest Unigene: | Hs.495250 |
| Nearest Refseq: | NM_004059 |
| Nearest Ensembl: | ENSG00000171097 |
| Gene Name: | "cysteine conjugate-beta lyase, cytoplasmic" |
| Gene Alias: | CCBL1 |
| Gene Description: | kynurenine aminotransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-25(CCCCCTTAAAGG,-,0.00),-24(CCCCTTAAAGGG,+,0.00),-24(CCCCTTAAAGGG,-,0.00),-23(CCCTTAAAGGGA,+,0.00),-22(CCTTAAAGGGAC,+,0.00)" |
