Difference between revisions of "TSS:Hg 102718.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-139 |entrez_id=23511 |gc_percent=0.696517 |gene_alias=KIAA0169|hNup188 |gene_description=nucleoporin 188 |gene_name=NUP188 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK300180:-23 BC035556:-24 AY358759:-26 AK225402:-44 ENST00000372586.3:-57 uc004bwr.4:-57 AB029017:-57 NM_014908:-171 JF432695:243 KJ904675:243 KU178553:243 KU178554:243 AB384111:244 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=-23 | ||
|distance_to_tss=-139 | |distance_to_tss=-139 | ||
| + | |end=128947562 | ||
|entrez_id=23511 | |entrez_id=23511 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=KIAA0169|hNup188 | |gene_alias=KIAA0169|hNup188 | ||
|gene_description=nucleoporin 188 | |gene_description=nucleoporin 188 | ||
| − | |gene_name= | + | |gene_id=22845 |
| + | |gene_name=dolichol kinase | ||
| + | |gene_source=HGNC:23406 | ||
| + | |gene_symbol=DOLK | ||
| + | |gene_synonyms=DK1 KIAA1094 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hNup188= | ||
| + | |hgnc_mgi_id=HGNC:23406 | ||
|nearest_ensembl=ENSG00000095319 | |nearest_ensembl=ENSG00000095319 | ||
|nearest_promoter_id=NM_015354 | |nearest_promoter_id=NM_015354 | ||
|nearest_refseq=NM_015354 | |nearest_refseq=NM_015354 | ||
|nearest_unigene=Hs.308340 | |nearest_unigene=Hs.308340 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=128947545 | ||
| + | |strand=- | ||
| + | |transcript_name=AK300180 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102718.1 | |tss_id=hg_102718.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DTE7 | ||
}} | }} | ||
Revision as of 19:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK300180 |
|---|---|
| Distance: | -23 |
| Num_trans: | 13 |
| All_trans: | AK300180:-23 BC035556:-24 AY358759:-26 AK225402:-44 ENST00000372586.3:-57 uc004bwr.4:-57 AB029017:-57 NM_014908:-171 JF432695:243 KJ904675:243 KU178553:243 KU178554:243 AB384111:244 |
TATA-Box annotation
| Distance to TSS: | -139 |
|---|---|
| Nearest PromoterID: | NM_015354 |
| Entrez ID: | 23511 |
| Nearest Unigene: | Hs.308340 |
| Nearest Refseq: | NM_015354 |
| Nearest Ensembl: | ENSG00000095319 |
| Gene Name: | dolichol kinase |
| Gene Alias: | KIAA0169 |
| Gene Description: | nucleoporin 188 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
