Difference between revisions of "TSS:Hg 10272.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=28 |entrez_id=54897 |gc_percent=0.631841 |gene_alias=CAS11|CST|SRG|ZNF693|dJ734G22.1 |gene_description=castor zinc finger 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CST= | ||
| + | |SRG= | ||
| + | |ZNF693= | ||
| + | |all_trans=ENST00000377022.7:0 ENST00000344008.5:0 uc001aro.6:0 uc001arp.3:0 DQ217660:0 AK092289:0 NM_001079843:-18 NM_017766:-18 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |dJ734G22.1= | ||
| + | |distance=0 | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
| + | |end=10796658 | ||
|entrez_id=54897 | |entrez_id=54897 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=CAS11|CST|SRG|ZNF693|dJ734G22.1 | |gene_alias=CAS11|CST|SRG|ZNF693|dJ734G22.1 | ||
|gene_description=castor zinc finger 1 | |gene_description=castor zinc finger 1 | ||
| − | |gene_name=CASZ1 | + | |gene_id=54897 |
| + | |gene_name=castor zinc finger 1 | ||
| + | |gene_source=HGNC:26002 | ||
| + | |gene_symbol=CASZ1 | ||
| + | |gene_synonyms=FLJ20321 SRG ZNF693 castor cst | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26002 | ||
|nearest_ensembl=ENSG00000130940 | |nearest_ensembl=ENSG00000130940 | ||
|nearest_promoter_id=NM_001079843 | |nearest_promoter_id=NM_001079843 | ||
|nearest_refseq=NM_017766 | |nearest_refseq=NM_017766 | ||
|nearest_unigene=Hs.439894 | |nearest_unigene=Hs.439894 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=10796637 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377022.7 ENST00000344008.5 uc001aro.6 uc001arp.3 DQ217660 AK092289 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10272.1 | |tss_id=hg_10272.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KRV8 Q86V15 | ||
}} | }} | ||
Revision as of 19:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377022.7 ENST00000344008.5 uc001aro.6 uc001arp.3 DQ217660 AK092289 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000377022.7:0 ENST00000344008.5:0 uc001aro.6:0 uc001arp.3:0 DQ217660:0 AK092289:0 NM_001079843:-18 NM_017766:-18 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_001079843 |
| Entrez ID: | 54897 |
| Nearest Unigene: | Hs.439894 |
| Nearest Refseq: | NM_017766 |
| Nearest Ensembl: | ENSG00000130940 |
| Gene Name: | castor zinc finger 1 |
| Gene Alias: | CAS11 |
| Gene Description: | castor zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
