Difference between revisions of "TSS:Hg 102727.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1813 |entrez_id=1384 |gc_percent=0.621891 |gene_alias=CAT|CAT1 |gene_description=carnitine O-acetyltransferase |gene_name=CRAT |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAT1= | ||
| + | |all_trans=ENST00000415948.5:-286 uc064wjj.1:-286 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-286 | ||
|distance_to_tss=1813 | |distance_to_tss=1813 | ||
| + | |end=129108990 | ||
|entrez_id=1384 | |entrez_id=1384 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=CAT|CAT1 | |gene_alias=CAT|CAT1 | ||
|gene_description=carnitine O-acetyltransferase | |gene_description=carnitine O-acetyltransferase | ||
| − | |gene_name=CRAT | + | |gene_id=1384 |
| + | |gene_name=carnitine O-acetyltransferase | ||
| + | |gene_source=HGNC:2342 | ||
| + | |gene_symbol=CRAT | ||
| + | |gene_synonyms=CAT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2342 | ||
|nearest_ensembl=ENSG00000095321 | |nearest_ensembl=ENSG00000095321 | ||
|nearest_promoter_id=NM_001346546 | |nearest_promoter_id=NM_001346546 | ||
|nearest_refseq=NM_000755 | |nearest_refseq=NM_000755 | ||
|nearest_unigene=Hs.12068 | |nearest_unigene=Hs.12068 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=129108979 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000415948.5 uc064wjj.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102727.1 | |tss_id=hg_102727.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H7C0E1 | ||
}} | }} | ||
Revision as of 19:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000415948.5 uc064wjj.1 |
|---|---|
| Distance: | -286 |
| Num_trans: | 2 |
| All_trans: | ENST00000415948.5:-286 uc064wjj.1:-286 |
TATA-Box annotation
| Distance to TSS: | 1813 |
|---|---|
| Nearest PromoterID: | NM_001346546 |
| Entrez ID: | 1384 |
| Nearest Unigene: | Hs.12068 |
| Nearest Refseq: | NM_000755 |
| Nearest Ensembl: | ENSG00000095321 |
| Gene Name: | carnitine O-acetyltransferase |
| Gene Alias: | CAT |
| Gene Description: | carnitine O-acetyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
