Difference between revisions of "TSS:Hg 102737.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=4 |entrez_id=389792 |gc_percent=0.696517 |gene_alias=bA247A12.2 |gene_description=immediate early response 5 like |gene_name=IER...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372491.3:0 NM_203434:0 uc010myt.2:0 BC064028:1 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=4 | |distance_to_tss=4 | ||
| + | |end=129178267 | ||
|entrez_id=389792 | |entrez_id=389792 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=bA247A12.2 | |gene_alias=bA247A12.2 | ||
|gene_description=immediate early response 5 like | |gene_description=immediate early response 5 like | ||
| − | |gene_name=IER5L | + | |gene_id=389792 |
| + | |gene_name=immediate early response 5-like | ||
| + | |gene_source=HGNC:23679 | ||
| + | |gene_symbol=IER5L | ||
| + | |gene_synonyms=bA247A12.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23679 | ||
|nearest_ensembl=ENSG00000188483 | |nearest_ensembl=ENSG00000188483 | ||
|nearest_promoter_id=NM_203434 | |nearest_promoter_id=NM_203434 | ||
|nearest_refseq=NM_203434 | |nearest_refseq=NM_203434 | ||
|nearest_unigene=Hs.529857 | |nearest_unigene=Hs.529857 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=129178247 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372491.3 NM_203434 uc010myt.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102737.1 | |tss_id=hg_102737.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5T953 | ||
}} | }} | ||
Revision as of 19:39, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372491.3 NM_203434 uc010myt.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000372491.3:0 NM_203434:0 uc010myt.2:0 BC064028:1 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_203434 |
| Entrez ID: | 389792 |
| Nearest Unigene: | Hs.529857 |
| Nearest Refseq: | NM_203434 |
| Nearest Ensembl: | ENSG00000188483 |
| Gene Name: | immediate early response 5-like |
| Gene Alias: | bA247A12.2 |
| Gene Description: | immediate early response 5 like |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
