Difference between revisions of "TSS:Hg 102798.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-27 |entrez_id=23048 |gc_percent=0.81592 |gene_alias=FBP17 |gene_description=formin binding protein 1 |gene_name=FNBP1 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000443566.6:6 ENST00000420781.5:6 NM_015033:6 uc011mbw.1:6 uc004bza.2:6 ENST00000355681.3:33 uc004byz.2:33 AK023681:33 ENST00000446176.6:38 uc004byw.2:38 AF265550:38 AB011126:52 BC062463:91 BC101755:164 BC143513:164 BC143515:164 BC143514:164 AB383906:223 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=6 | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
| + | |end=130043243 | ||
|entrez_id=23048 | |entrez_id=23048 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=FBP17 | |gene_alias=FBP17 | ||
|gene_description=formin binding protein 1 | |gene_description=formin binding protein 1 | ||
| − | |gene_name=FNBP1 | + | |gene_id=23048 |
| + | |gene_name=formin binding protein 1 | ||
| + | |gene_source=HGNC:17069 | ||
| + | |gene_symbol=FNBP1 | ||
| + | |gene_synonyms=FBP17 KIAA0554 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17069 | ||
|nearest_ensembl=ENSG00000187239 | |nearest_ensembl=ENSG00000187239 | ||
|nearest_promoter_id=NM_015033 | |nearest_promoter_id=NM_015033 | ||
|nearest_refseq=NM_015033 | |nearest_refseq=NM_015033 | ||
|nearest_unigene=Hs.189409 | |nearest_unigene=Hs.189409 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=130043199 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000443566.6 ENST00000420781.5 NM_015033 uc011mbw.1 uc004bza.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102798.1 | |tss_id=hg_102798.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7ZL14 Q96RU3 | ||
}} | }} | ||
Revision as of 19:41, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000443566.6 ENST00000420781.5 NM_015033 uc011mbw.1 uc004bza.2 |
|---|---|
| Distance: | 6 |
| Num_trans: | 18 |
| All_trans: | ENST00000443566.6:6 ENST00000420781.5:6 NM_015033:6 uc011mbw.1:6 uc004bza.2:6 ENST00000355681.3:33 uc004byz.2:33 AK023681:33 ENST00000446176.6:38 uc004byw.2:38 AF265550:38 AB011126:52 BC062463:91 BC101755:164 BC143513:164 BC143515:164 BC143514:164 AB383906:223 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_015033 |
| Entrez ID: | 23048 |
| Nearest Unigene: | Hs.189409 |
| Nearest Refseq: | NM_015033 |
| Nearest Ensembl: | ENSG00000187239 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | FBP17 |
| Gene Description: | formin binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
