Difference between revisions of "TSS:Hg 10280.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-1 |entrez_id=10747 |gc_percent=0.651741 |gene_alias=MAP19|MASP-2|MASP1P1|sMAP |gene_description=mannan binding lectin serine pe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MASP-2= | ||
| + | |MASP1P1= | ||
| + | |all_trans=ENST00000400898.3:0 NM_006610:0 NM_139208:0 uc001arv.4:0 AK290823:0 AB008047:0 ENST00000480221.1:6 uc057cfb.1:6 BC052299:6 BC067359:6 BC080556:6 Y18281:6 Y18284:6 ENST00000400897.7:10 uc001aru.4:10 Y09926:10 X98400:10 Y18283:11 BC156886:108 BC156086:108 Y18282:139 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
| + | |end=11047247 | ||
|entrez_id=10747 | |entrez_id=10747 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=MAP19|MASP-2|MASP1P1|sMAP | |gene_alias=MAP19|MASP-2|MASP1P1|sMAP | ||
|gene_description=mannan binding lectin serine peptidase 2 | |gene_description=mannan binding lectin serine peptidase 2 | ||
| − | |gene_name=MASP2 | + | |gene_id=10747 |
| + | |gene_name=mannan binding lectin serine peptidase 2 | ||
| + | |gene_source=HGNC:6902 | ||
| + | |gene_symbol=MASP2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6902 | ||
|nearest_ensembl=ENSG00000009724 | |nearest_ensembl=ENSG00000009724 | ||
|nearest_promoter_id=NM_139208 | |nearest_promoter_id=NM_139208 | ||
|nearest_refseq=NM_006610 | |nearest_refseq=NM_006610 | ||
|nearest_unigene=Hs.655645 | |nearest_unigene=Hs.655645 | ||
| + | |num_trans=21 | ||
| + | |sMAP= | ||
| + | |species=human | ||
| + | |start=11047232 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000400898.3 NM_006610 NM_139208 uc001arv.4 AK290823 AB008047 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10280.1 | |tss_id=hg_10280.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O00187 | ||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000400898.3 NM_006610 NM_139208 uc001arv.4 AK290823 AB008047 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000400898.3:0 NM_006610:0 NM_139208:0 uc001arv.4:0 AK290823:0 AB008047:0 ENST00000480221.1:6 uc057cfb.1:6 BC052299:6 BC067359:6 BC080556:6 Y18281:6 Y18284:6 ENST00000400897.7:10 uc001aru.4:10 Y09926:10 X98400:10 Y18283:11 BC156886:108 BC156086:108 Y18282:139 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_139208 |
| Entrez ID: | 10747 |
| Nearest Unigene: | Hs.655645 |
| Nearest Refseq: | NM_006610 |
| Nearest Ensembl: | ENSG00000009724 |
| Gene Name: | mannan binding lectin serine peptidase 2 |
| Gene Alias: | MAP19 |
| Gene Description: | mannan binding lectin serine peptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
