Difference between revisions of "TSS:Hg 102808.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=-61 |entrez_id=84929 |gc_percent=0.676617 |gene_alias=- |gene_description=fibrinogen C domain containing 1 |gene_name=FIBCD1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000486250.5:-6 uc064woh.1:-6 ENST00000451466.1:-7 uc064wof.1:-7 ENST00000448616.5:57 NM_001145106:57 uc011mcc.2:57 AK300287:89 ENST00000463475.1:-153 uc064woi.1:-153 NM_032843:273 ENST00000372338.8:275 uc004bzz.4:275 BC032953:275 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=-6 | ||
|distance_to_tss=-61 | |distance_to_tss=-61 | ||
| + | |end=130939133 | ||
|entrez_id=84929 | |entrez_id=84929 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=fibrinogen C domain containing 1 | |gene_description=fibrinogen C domain containing 1 | ||
| − | |gene_name=FIBCD1 | + | |gene_id=84929 |
| + | |gene_name=fibrinogen C domain containing 1 | ||
| + | |gene_source=HGNC:25922 | ||
| + | |gene_symbol=FIBCD1 | ||
| + | |gene_synonyms=FLJ14810 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25922 | ||
|nearest_ensembl=ENSG00000130720 | |nearest_ensembl=ENSG00000130720 | ||
|nearest_promoter_id=NM_001145106 | |nearest_promoter_id=NM_001145106 | ||
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=130939124 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000486250.5 uc064woh.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102808.1 | |tss_id=hg_102808.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000486250.5 uc064woh.1 |
|---|---|
| Distance: | -6 |
| Num_trans: | 14 |
| All_trans: | ENST00000486250.5:-6 uc064woh.1:-6 ENST00000451466.1:-7 uc064wof.1:-7 ENST00000448616.5:57 NM_001145106:57 uc011mcc.2:57 AK300287:89 ENST00000463475.1:-153 uc064woi.1:-153 NM_032843:273 ENST00000372338.8:275 uc004bzz.4:275 BC032953:275 |
TATA-Box annotation
| Distance to TSS: | -61 |
|---|---|
| Nearest PromoterID: | NM_001145106 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | fibrinogen C domain containing 1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
