Difference between revisions of "TSS:Hg 102824.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=5922 |entrez_id=286336 |gc_percent=0.641791 |gene_alias=C9orf59 |gene_description=family with sequence similarity 78 member A |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000464831.1:65 uc064wqk.1:65 ENST00000372269.7:95 uc004caj.4:95 BC037559:95 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=65 | ||
|distance_to_tss=5922 | |distance_to_tss=5922 | ||
| + | |end=131270607 | ||
|entrez_id=286336 | |entrez_id=286336 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=C9orf59 | |gene_alias=C9orf59 | ||
|gene_description=family with sequence similarity 78 member A | |gene_description=family with sequence similarity 78 member A | ||
| − | |gene_name=FAM78A | + | |gene_id=286336 |
| + | |gene_name=family with sequence similarity 78 member A | ||
| + | |gene_source=HGNC:25465 | ||
| + | |gene_symbol=FAM78A | ||
| + | |gene_synonyms=FLJ00024 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25465 | ||
|nearest_ensembl=ENSG00000126882 | |nearest_ensembl=ENSG00000126882 | ||
|nearest_promoter_id=NM_033387 | |nearest_promoter_id=NM_033387 | ||
|nearest_refseq=NM_033387 | |nearest_refseq=NM_033387 | ||
|nearest_unigene=Hs.143878 | |nearest_unigene=Hs.143878 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=131270587 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000464831.1 uc064wqk.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102824.1 | |tss_id=hg_102824.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5JUQ1 | ||
}} | }} | ||
Revision as of 19:43, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000464831.1 uc064wqk.1 |
|---|---|
| Distance: | 65 |
| Num_trans: | 5 |
| All_trans: | ENST00000464831.1:65 uc064wqk.1:65 ENST00000372269.7:95 uc004caj.4:95 BC037559:95 |
TATA-Box annotation
| Distance to TSS: | 5922 |
|---|---|
| Nearest PromoterID: | NM_033387 |
| Entrez ID: | 286336 |
| Nearest Unigene: | Hs.143878 |
| Nearest Refseq: | NM_033387 |
| Nearest Ensembl: | ENSG00000126882 |
| Gene Name: | family with sequence similarity 78 member A |
| Gene Alias: | C9orf59 |
| Gene Description: | family with sequence similarity 78 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
