Difference between revisions of "TSS:Hg 102838.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=75 |entrez_id=83549 |gc_percent=0.791045 |gene_alias=URK1 |gene_description=uridine-cytidine kinase 1 |gene_name=UCK1 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372210.7:0 ENST00000372211.7:0 uc010mzk.5:0 uc031tfj.2:0 AF125106:0 AK295471:0 AK307475:0 AF237290:1 AF254133:5 CR457281:5 CU677347:5 KU178794:5 KU178795:5 KU178796:5 ENST00000491309.5:-16 uc064wrf.1:-16 AK057848:-16 ENST00000459858.1:-23 uc064wri.1:-23 BC091495:-25 ENST00000372208.7:-38 uc004cba.4:-38 BC015547:-38 ENST00000494584.5:-43 uc064wrh.1:-43 ENST00000372215.4:-47 uc004cay.4:-47 AK022317:-47 NM_001261450:-54 NM_001135954:-54 NM_001318519:-54 NR_134666:-54 NR_134667:-54 NM_001261451:-54 NM_031432:-54 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=0 | ||
|distance_to_tss=75 | |distance_to_tss=75 | ||
| + | |end=131531221 | ||
|entrez_id=83549 | |entrez_id=83549 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
|gene_alias=URK1 | |gene_alias=URK1 | ||
|gene_description=uridine-cytidine kinase 1 | |gene_description=uridine-cytidine kinase 1 | ||
| − | |gene_name=UCK1 | + | |gene_id=83549 |
| + | |gene_name=uridine-cytidine kinase 1 | ||
| + | |gene_source=HGNC:14859 | ||
| + | |gene_symbol=UCK1 | ||
| + | |gene_synonyms=FLJ12255 URK1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14859 | ||
|nearest_ensembl=ENSG00000130717 | |nearest_ensembl=ENSG00000130717 | ||
|nearest_promoter_id=NM_001261451 | |nearest_promoter_id=NM_001261451 | ||
|nearest_refseq=NM_031432 | |nearest_refseq=NM_031432 | ||
|nearest_unigene=Hs.9597 | |nearest_unigene=Hs.9597 | ||
| + | |num_trans=35 | ||
| + | |species=human | ||
| + | |start=131531178 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372210.7 ENST00000372211.7 uc010mzk.5 uc031tfj.2 AF125106 AK295471 AK307475 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102838.1 | |tss_id=hg_102838.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9HA47 | ||
}} | }} | ||
Revision as of 19:43, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000372210.7 ENST00000372211.7 uc010mzk.5 uc031tfj.2 AF125106 AK295471 AK307475 |
|---|---|
| Distance: | 0 |
| Num_trans: | 35 |
| All_trans: | ENST00000372210.7:0 ENST00000372211.7:0 uc010mzk.5:0 uc031tfj.2:0 AF125106:0 AK295471:0 AK307475:0 AF237290:1 AF254133:5 CR457281:5 CU677347:5 KU178794:5 KU178795:5 KU178796:5 ENST00000491309.5:-16 uc064wrf.1:-16 AK057848:-16 ENST00000459858.1:-23 uc064wri.1:-23 BC091495:-25 ENST00000372208.7:-38 uc004cba.4:-38 BC015547:-38 ENST00000494584.5:-43 uc064wrh.1:-43 ENST00000372215.4:-47 uc004cay.4:-47 AK022317:-47 NM_001261450:-54 NM_001135954:-54 NM_001318519:-54 NR_134666:-54 NR_134667:-54 NM_001261451:-54 NM_031432:-54 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NM_001261451 |
| Entrez ID: | 83549 |
| Nearest Unigene: | Hs.9597 |
| Nearest Refseq: | NM_031432 |
| Nearest Ensembl: | ENSG00000130717 |
| Gene Name: | uridine-cytidine kinase 1 |
| Gene Alias: | URK1 |
| Gene Description: | uridine-cytidine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
