Difference between revisions of "TSS:Hg 102840.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=87837 |entrez_id=2889 |gc_percent=0.59204 |gene_alias=C3G|GRF2 |gene_description=Rap guanine nucleotide exchange factor 1 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GRF2= | ||
| + | |all_trans=DQ925677:104 DQ925678:104 DQ925679:104 DQ925680:104 DQ925681:104 DQ925682:104 DQ925683:104 DQ925684:104 ENST00000414781.1:157 uc064wrn.1:157 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=104 | ||
|distance_to_tss=87837 | |distance_to_tss=87837 | ||
| + | |end=131622015 | ||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=C3G|GRF2 | |gene_alias=C3G|GRF2 | ||
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
| − | |gene_name=RAPGEF1 | + | |gene_id=2889 |
| + | |gene_name=Rap guanine nucleotide exchange factor 1 | ||
| + | |gene_source=HGNC:4568 | ||
| + | |gene_symbol=RAPGEF1 | ||
| + | |gene_synonyms=C3G | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4568 | ||
|nearest_ensembl=ENSG00000107263 | |nearest_ensembl=ENSG00000107263 | ||
|nearest_promoter_id=NM_198679 | |nearest_promoter_id=NM_198679 | ||
|nearest_refseq=NM_005312 | |nearest_refseq=NM_005312 | ||
|nearest_unigene=Hs.127897 | |nearest_unigene=Hs.127897 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=131621994 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102840.1 | |tss_id=hg_102840.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A5XEI4 A5XEI5 A5XEI6 A5XEI7 A5XEI8 A5XEI9 A5XEJ0 A5XEJ1 | ||
}} | }} | ||
Revision as of 19:43, 8 March 2018
Basic information about the TSS
|
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ925677 DQ925678 DQ925679 DQ925680 DQ925681 DQ925682 DQ925683 DQ925684 |
|---|---|
| Distance: | 104 |
| Num_trans: | 10 |
| All_trans: | DQ925677:104 DQ925678:104 DQ925679:104 DQ925680:104 DQ925681:104 DQ925682:104 DQ925683:104 DQ925684:104 ENST00000414781.1:157 uc064wrn.1:157 |
TATA-Box annotation
| Distance to TSS: | 87837 |
|---|---|
| Nearest PromoterID: | NM_198679 |
| Entrez ID: | 2889 |
| Nearest Unigene: | Hs.127897 |
| Nearest Refseq: | NM_005312 |
| Nearest Ensembl: | ENSG00000107263 |
| Gene Name: | Rap guanine nucleotide exchange factor 1 |
| Gene Alias: | C3G |
| Gene Description: | Rap guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
