Difference between revisions of "TSS:Hg 102904.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=565 |entrez_id=64794 |gc_percent=0.457711 |gene_alias=PPP1R25 |gene_description=DEAD-box helicase 31 |gene_name=DDX31 |gene_type...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ903102:203 CU680380:203 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=203 | ||
|distance_to_tss=565 | |distance_to_tss=565 | ||
| + | |end=132662765 | ||
|entrez_id=64794 | |entrez_id=64794 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=PPP1R25 | |gene_alias=PPP1R25 | ||
|gene_description=DEAD-box helicase 31 | |gene_description=DEAD-box helicase 31 | ||
| − | |gene_name=DDX31 | + | |gene_id=64794 |
| + | |gene_name=DEAD-box helicase 31 | ||
| + | |gene_source=HGNC:16715 | ||
| + | |gene_symbol=DDX31 | ||
| + | |gene_synonyms=FLJ13633 FLJ14578 FLJ23349 PPP1R25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16715 | ||
|nearest_ensembl=ENSG00000125485 | |nearest_ensembl=ENSG00000125485 | ||
|nearest_promoter_id=NM_001322343 | |nearest_promoter_id=NM_001322343 | ||
|nearest_refseq=NM_022779 | |nearest_refseq=NM_022779 | ||
|nearest_unigene=Hs.660767 | |nearest_unigene=Hs.660767 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=132662756 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ903102 CU680380 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102904.1 | |tss_id=hg_102904.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:46, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ903102 CU680380 |
|---|---|
| Distance: | 203 |
| Num_trans: | 2 |
| All_trans: | KJ903102:203 CU680380:203 |
TATA-Box annotation
| Distance to TSS: | 565 |
|---|---|
| Nearest PromoterID: | NM_001322343 |
| Entrez ID: | 64794 |
| Nearest Unigene: | Hs.660767 |
| Nearest Refseq: | NM_022779 |
| Nearest Ensembl: | ENSG00000125485 |
| Gene Name: | DEAD-box helicase 31 |
| Gene Alias: | PPP1R25 |
| Gene Description: | DEAD-box helicase 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
