Difference between revisions of "TSS:Hg 102948.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=366 |entrez_id=5900 |gc_percent=0.616915 |gene_alias=RGDS|RGF|RalGEF |gene_description=ral guanine nucleotide dissociation stimu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RGF= | ||
| + | |RalGEF= | ||
| + | |all_trans=ENST00000393157.7:-360 NM_001271775:-360 uc004ccr.4:-360 AK127524:-360 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-360 | ||
|distance_to_tss=366 | |distance_to_tss=366 | ||
| + | |end=133129041 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=RGDS|RGF|RalGEF | |gene_alias=RGDS|RGF|RalGEF | ||
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
| − | |gene_name=RALGDS | + | |gene_id=5900 |
| + | |gene_name=ral guanine nucleotide dissociation stimulator | ||
| + | |gene_source=HGNC:9842 | ||
| + | |gene_symbol=RALGDS | ||
| + | |gene_synonyms=RGDS RGF RalGEF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9842 | ||
|nearest_ensembl=ENSG00000160271 | |nearest_ensembl=ENSG00000160271 | ||
|nearest_promoter_id=NM_001271775 | |nearest_promoter_id=NM_001271775 | ||
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=133129028 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000393157.7 NM_001271775 uc004ccr.4 AK127524 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102948.1 | |tss_id=hg_102948.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q12967 Q8N4Y1 | ||
}} | }} | ||
Revision as of 19:48, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000393157.7 NM_001271775 uc004ccr.4 AK127524 |
|---|---|
| Distance: | -360 |
| Num_trans: | 4 |
| All_trans: | ENST00000393157.7:-360 NM_001271775:-360 uc004ccr.4:-360 AK127524:-360 |
TATA-Box annotation
| Distance to TSS: | 366 |
|---|---|
| Nearest PromoterID: | NM_001271775 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
