Difference between revisions of "TSS:Hg 102976.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=19622 |entrez_id=28 |gc_percent=0.631841 |gene_alias=A3GALNT|A3GALT1|GTB|NAGAT |gene_description="ABO, alpha 1-3-N-acetylgalacto...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |A3GALT1= | ||
| + | |GTB= | ||
| + | |NAGAT= | ||
| + | |all_trans=U15197:-82 S44054:-93 AK124587:97 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=-82 | ||
|distance_to_tss=19622 | |distance_to_tss=19622 | ||
| + | |end=133255599 | ||
|entrez_id=28 | |entrez_id=28 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=A3GALNT|A3GALT1|GTB|NAGAT | |gene_alias=A3GALNT|A3GALT1|GTB|NAGAT | ||
|gene_description="ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase" | |gene_description="ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase" | ||
| − | |gene_name=ABO | + | |gene_id=28 |
| + | |gene_name="ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)" | ||
| + | |gene_source=HGNC:79 | ||
| + | |gene_symbol=ABO | ||
| + | |gene_synonyms=A3GALNT A3GALT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:79 | ||
|nearest_ensembl=ENSG00000175164 | |nearest_ensembl=ENSG00000175164 | ||
|nearest_promoter_id=NM_020469 | |nearest_promoter_id=NM_020469 | ||
|nearest_refseq=NM_020469 | |nearest_refseq=NM_020469 | ||
|nearest_unigene=Hs.654423 | |nearest_unigene=Hs.654423 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=133255585 | ||
| + | |strand=- | ||
| + | |transcript_name=U15197 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102976.1 | |tss_id=hg_102976.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:49, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | U15197 |
|---|---|
| Distance: | -82 |
| Num_trans: | 3 |
| All_trans: | U15197:-82 S44054:-93 AK124587:97 |
TATA-Box annotation
| Distance to TSS: | 19622 |
|---|---|
| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | "ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)" |
| Gene Alias: | A3GALNT |
| Gene Description: | "ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase" |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
