Difference between revisions of "TSS:Hg 10301.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=146 |entrez_id=26232 |gc_percent=0.651741 |gene_alias=FBG1|FBX2|Fbs1|NFB42|OCP1 |gene_description=F-box protein 2 |gene_name=FB...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FBX2= | ||
| + | |Fbs1= | ||
| + | |NFB42= | ||
| + | |OCP1= | ||
| + | |all_trans=ENST00000354287.4:0 uc001asj.4:0 AF187318:0 NM_012168:-105 BC014957:195 BC096747:213 AK313019:213 BC025233:229 AK308531:300 DQ892848:302 DQ892849:302 DQ896095:302 CR542110:304 KJ898609:304 CU692940:304 AB463629:304 ENST00000466919.1:447 uc057cgi.1:447 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=146 | |distance_to_tss=146 | ||
| + | |end=11654726 | ||
|entrez_id=26232 | |entrez_id=26232 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=FBG1|FBX2|Fbs1|NFB42|OCP1 | |gene_alias=FBG1|FBX2|Fbs1|NFB42|OCP1 | ||
|gene_description=F-box protein 2 | |gene_description=F-box protein 2 | ||
| − | |gene_name=FBXO2 | + | |gene_id=26232 |
| + | |gene_name=F-box protein 2 | ||
| + | |gene_source=HGNC:13581 | ||
| + | |gene_symbol=FBXO2 | ||
| + | |gene_synonyms=FBX2 Fbg1 Fbs1 Nfb42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13581 | ||
|nearest_ensembl=ENSG00000116661 | |nearest_ensembl=ENSG00000116661 | ||
|nearest_promoter_id=NM_012168 | |nearest_promoter_id=NM_012168 | ||
|nearest_refseq=NM_012168 | |nearest_refseq=NM_012168 | ||
|nearest_unigene=Hs.132753 | |nearest_unigene=Hs.132753 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=11654643 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000354287.4 uc001asj.4 AF187318 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10301.1 | |tss_id=hg_10301.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9UK22 | ||
}} | }} | ||
Revision as of 19:51, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000354287.4 uc001asj.4 AF187318 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000354287.4:0 uc001asj.4:0 AF187318:0 NM_012168:-105 BC014957:195 BC096747:213 AK313019:213 BC025233:229 AK308531:300 DQ892848:302 DQ892849:302 DQ896095:302 CR542110:304 KJ898609:304 CU692940:304 AB463629:304 ENST00000466919.1:447 uc057cgi.1:447 |
TATA-Box annotation
| Distance to TSS: | 146 |
|---|---|
| Nearest PromoterID: | NM_012168 |
| Entrez ID: | 26232 |
| Nearest Unigene: | Hs.132753 |
| Nearest Refseq: | NM_012168 |
| Nearest Ensembl: | ENSG00000116661 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG1 |
| Gene Description: | F-box protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
