Difference between revisions of "TSS:Hg 103049.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=20 |entrez_id=8019 |gc_percent=0.776119 |gene_alias=ORFX|RING3L |gene_description=bromodomain containing 3 |gene_name=BRD3 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RING3L= | ||
| + | |all_trans=BC010699:2 ENST00000303407.11:-10 uc004cew.4:-10 NM_007371:-12 D26362:21 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=2 | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
| + | |end=134068007 | ||
|entrez_id=8019 | |entrez_id=8019 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=ORFX|RING3L | |gene_alias=ORFX|RING3L | ||
|gene_description=bromodomain containing 3 | |gene_description=bromodomain containing 3 | ||
| − | |gene_name=BRD3 | + | |gene_id=8019 |
| + | |gene_name=bromodomain containing 3 | ||
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000169925 | |nearest_ensembl=ENSG00000169925 | ||
|nearest_promoter_id=NM_007371 | |nearest_promoter_id=NM_007371 | ||
|nearest_refseq=NM_007371 | |nearest_refseq=NM_007371 | ||
|nearest_unigene=Hs.522472 | |nearest_unigene=Hs.522472 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=134067990 | ||
| + | |strand=- | ||
| + | |transcript_name=BC010699 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103049.1 | |tss_id=hg_103049.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC010699 |
|---|---|
| Distance: | 2 |
| Num_trans: | 5 |
| All_trans: | BC010699:2 ENST00000303407.11:-10 uc004cew.4:-10 NM_007371:-12 D26362:21 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_007371 |
| Entrez ID: | 8019 |
| Nearest Unigene: | Hs.522472 |
| Nearest Refseq: | NM_007371 |
| Nearest Ensembl: | ENSG00000169925 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | ORFX |
| Gene Description: | bromodomain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
