Difference between revisions of "TSS:Hg 103052.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.185 |distance_to_tss=-508 |entrez_id=8019 |gc_percent=0.810945 |gene_alias=ORFX|RING3L |gene_description=bromodomain containing 3 |gene_name=BRD3 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RING3L= | ||
| + | |all_trans=ENST00000371834.6:0 uc004cex.3:0 AK299519:0 BC032124:0 NM_007371:475 ENST00000303407.11:477 uc004cew.4:477 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| + | |distance=0 | ||
|distance_to_tss=-508 | |distance_to_tss=-508 | ||
| + | |end=134068560 | ||
|entrez_id=8019 | |entrez_id=8019 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=ORFX|RING3L | |gene_alias=ORFX|RING3L | ||
|gene_description=bromodomain containing 3 | |gene_description=bromodomain containing 3 | ||
| − | |gene_name=BRD3 | + | |gene_id=8019 |
| + | |gene_name=bromodomain containing 3 | ||
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000169925 | |nearest_ensembl=ENSG00000169925 | ||
|nearest_promoter_id=NM_007371 | |nearest_promoter_id=NM_007371 | ||
|nearest_refseq=NM_007371 | |nearest_refseq=NM_007371 | ||
|nearest_unigene=Hs.522472 | |nearest_unigene=Hs.522472 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=134068493 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000371834.6 uc004cex.3 AK299519 BC032124 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103052.1 | |tss_id=hg_103052.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DS09 Q15059 | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371834.6 uc004cex.3 AK299519 BC032124 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000371834.6:0 uc004cex.3:0 AK299519:0 BC032124:0 NM_007371:475 ENST00000303407.11:477 uc004cew.4:477 |
TATA-Box annotation
| Distance to TSS: | -508 |
|---|---|
| Nearest PromoterID: | NM_007371 |
| Entrez ID: | 8019 |
| Nearest Unigene: | Hs.522472 |
| Nearest Refseq: | NM_007371 |
| Nearest Ensembl: | ENSG00000169925 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | ORFX |
| Gene Description: | bromodomain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
