Difference between revisions of "TSS:Hg 10307.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=131 |entrez_id=10459 |gc_percent=0.776119 |gene_alias=FANCV|MAD2B|POLZ2|REV7 |gene_description=MAD2 mitotic arrest deficient-lik...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MAD2B= | ||
| + | |POLZ2= | ||
| + | |REV7= | ||
| + | |all_trans=ENST00000376672.5:7 uc057cgr.1:7 ENST00000376655.1:-97 uc057cgw.1:-97 ENST00000376667.7:-113 uc009vnc.4:-113 NM_001127325:-125 ENST00000235310.7:-154 uc001asq.5:-154 AK094316:-154 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=7 | ||
|distance_to_tss=131 | |distance_to_tss=131 | ||
| + | |end=11691496 | ||
|entrez_id=10459 | |entrez_id=10459 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=FANCV|MAD2B|POLZ2|REV7 | |gene_alias=FANCV|MAD2B|POLZ2|REV7 | ||
|gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | |gene_description=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
| − | |gene_name=MAD2L2 | + | |gene_id=10459 |
| + | |gene_name=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
| + | |gene_source=HGNC:6764 | ||
| + | |gene_symbol=MAD2L2 | ||
| + | |gene_synonyms=MAD2B POLZ2 REV7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6764 | ||
|nearest_ensembl=ENSG00000116670 | |nearest_ensembl=ENSG00000116670 | ||
|nearest_promoter_id=NM_001127325 | |nearest_promoter_id=NM_001127325 | ||
|nearest_refseq=NM_006341 | |nearest_refseq=NM_006341 | ||
|nearest_unigene=Hs.19400 | |nearest_unigene=Hs.19400 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=11691483 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376672.5 uc057cgr.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10307.1 | |tss_id=hg_10307.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1AK44 | ||
}} | }} | ||
Revision as of 19:53, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376672.5 uc057cgr.1 |
|---|---|
| Distance: | 7 |
| Num_trans: | 10 |
| All_trans: | ENST00000376672.5:7 uc057cgr.1:7 ENST00000376655.1:-97 uc057cgw.1:-97 ENST00000376667.7:-113 uc009vnc.4:-113 NM_001127325:-125 ENST00000235310.7:-154 uc001asq.5:-154 AK094316:-154 |
TATA-Box annotation
| Distance to TSS: | 131 |
|---|---|
| Nearest PromoterID: | NM_001127325 |
| Entrez ID: | 10459 |
| Nearest Unigene: | Hs.19400 |
| Nearest Refseq: | NM_006341 |
| Nearest Ensembl: | ENSG00000116670 |
| Gene Name: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Alias: | FANCV |
| Gene Description: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
