Difference between revisions of "TSS:Hg 103099.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=5093 |entrez_id=3933 |gc_percent=0.656716 |gene_alias=PMFA|TLC|TP|VEGP |gene_description=lipocalin 1 |gene_name=LCN1 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TLC= | ||
| + | |TP= | ||
| + | |VEGP= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance= | ||
|distance_to_tss=5093 | |distance_to_tss=5093 | ||
| + | |end=135526531 | ||
|entrez_id=3933 | |entrez_id=3933 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_002297 | |nearest_refseq=NM_002297 | ||
|nearest_unigene=Hs.530311 | |nearest_unigene=Hs.530311 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=135526530 | ||
| + | |strand=- | ||
|tata_box="10(CTCTTTATGGAG,+,0.00)" | |tata_box="10(CTCTTTATGGAG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103099.1 | |tss_id=hg_103099.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:54, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5093 |
|---|---|
| Nearest PromoterID: | NM_001252617 |
| Entrez ID: | 3933 |
| Nearest Unigene: | Hs.530311 |
| Nearest Refseq: | NM_002297 |
| Nearest Ensembl: | ENSG00000160349 |
| Gene Name: | LCN1 |
| Gene Alias: | PMFA |
| Gene Description: | lipocalin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "10(CTCTTTATGGAG,+,0.00)" |
