Difference between revisions of "TSS:Hg 10310.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=83 |entrez_id=374946 |gc_percent=0.800995 |gene_alias=AGPA3119|C1orf187|UNQ3119|neucrin |gene_description=dorsal inhibitory axo...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C1orf187= | ||
| + | |UNQ3119= | ||
| + | |all_trans=ENST00000235310.7:129 uc001asq.5:129 AK094316:129 NM_001127325:158 ENST00000376667.7:170 uc009vnc.4:170 ENST00000376655.1:186 uc057cgw.1:186 ENST00000376672.5:302 uc057cgr.1:302 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=129 | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
| + | |end=11691835 | ||
|entrez_id=374946 | |entrez_id=374946 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=AGPA3119|C1orf187|UNQ3119|neucrin | |gene_alias=AGPA3119|C1orf187|UNQ3119|neucrin | ||
|gene_description=dorsal inhibitory axon guidance protein | |gene_description=dorsal inhibitory axon guidance protein | ||
| − | |gene_name= | + | |gene_id=10459 |
| + | |gene_name=MAD2 mitotic arrest deficient-like 2 (yeast) | ||
| + | |gene_source=HGNC:6764 | ||
| + | |gene_symbol=MAD2L2 | ||
| + | |gene_synonyms=MAD2B POLZ2 REV7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6764 | ||
|nearest_ensembl=ENSG00000162490 | |nearest_ensembl=ENSG00000162490 | ||
|nearest_promoter_id=NM_198545 | |nearest_promoter_id=NM_198545 | ||
|nearest_refseq=NM_198545 | |nearest_refseq=NM_198545 | ||
|nearest_unigene=Hs.632364 | |nearest_unigene=Hs.632364 | ||
| + | |neucrin= | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=11691778 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000235310.7 uc001asq.5 AK094316 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10310.1 | |tss_id=hg_10310.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R4I4 Q9UI95 | ||
}} | }} | ||
Revision as of 19:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000235310.7 uc001asq.5 AK094316 |
|---|---|
| Distance: | 129 |
| Num_trans: | 10 |
| All_trans: | ENST00000235310.7:129 uc001asq.5:129 AK094316:129 NM_001127325:158 ENST00000376667.7:170 uc009vnc.4:170 ENST00000376655.1:186 uc057cgw.1:186 ENST00000376672.5:302 uc057cgr.1:302 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_198545 |
| Entrez ID: | 374946 |
| Nearest Unigene: | Hs.632364 |
| Nearest Refseq: | NM_198545 |
| Nearest Ensembl: | ENSG00000162490 |
| Gene Name: | MAD2 mitotic arrest deficient-like 2 (yeast) |
| Gene Alias: | AGPA3119 |
| Gene Description: | dorsal inhibitory axon guidance protein |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
