Difference between revisions of "TSS:Hg 103125.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=190 |entrez_id=90120 |gc_percent=0.781095 |gene_alias=- |gene_description=chromosome 9 open reading frame 69 |gene_name=C9orf69...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC014304:-70 BC111053:85 BC013282:-112 AK023162:-127 AK091349:-132 ENST00000557985.2:141 uc064xav.1:141 BC092490:141 ENST00000418388.5:-151 uc004cgx.6:-151 BC021231:-151 NR_134506:-171 NM_152833:-173 ENST00000448040.2:237 uc064xax.1:237 ENST00000561457.2:244 NM_001256526:244 uc031tfs.1:244 ENST00000447934.1:401 uc064xaw.1:401 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-70 | ||
|distance_to_tss=190 | |distance_to_tss=190 | ||
| + | |end=136118712 | ||
|entrez_id=90120 | |entrez_id=90120 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chromosome 9 open reading frame 69 | |gene_description=chromosome 9 open reading frame 69 | ||
| − | |gene_name=C9orf69 | + | |gene_id=90120 |
| + | |gene_name=chromosome 9 open reading frame 69 | ||
| + | |gene_source=HGNC:31009 | ||
| + | |gene_symbol=C9orf69 | ||
| + | |gene_synonyms=bA83N9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31009 | ||
|nearest_ensembl=ENSG00000238227 | |nearest_ensembl=ENSG00000238227 | ||
|nearest_promoter_id=NR_134506 | |nearest_promoter_id=NR_134506 | ||
|nearest_refseq=NM_152833 | |nearest_refseq=NM_152833 | ||
|nearest_unigene=Hs.287411 | |nearest_unigene=Hs.287411 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=136118674 | ||
| + | |strand=- | ||
| + | |transcript_name=BC014304 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103125.1 | |tss_id=hg_103125.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:56, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC014304 |
|---|---|
| Distance: | -70 |
| Num_trans: | 20 |
| All_trans: | BC014304:-70 BC111053:85 BC013282:-112 AK023162:-127 AK091349:-132 ENST00000557985.2:141 uc064xav.1:141 BC092490:141 ENST00000418388.5:-151 uc004cgx.6:-151 BC021231:-151 NR_134506:-171 NM_152833:-173 ENST00000448040.2:237 uc064xax.1:237 ENST00000561457.2:244 NM_001256526:244 uc031tfs.1:244 ENST00000447934.1:401 uc064xaw.1:401 |
TATA-Box annotation
| Distance to TSS: | 190 |
|---|---|
| Nearest PromoterID: | NR_134506 |
| Entrez ID: | 90120 |
| Nearest Unigene: | Hs.287411 |
| Nearest Refseq: | NM_152833 |
| Nearest Ensembl: | ENSG00000238227 |
| Gene Name: | chromosome 9 open reading frame 69 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 69 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
