Difference between revisions of "TSS:Hg 103190.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=6067 |entrez_id=406913 |gc_percent=0.621891 |gene_alias=MIRN126|miRNA126|mir-126 |gene_description=microRNA 126 |gene_name=MIR1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC007269:-459 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=-459 | ||
|distance_to_tss=6067 | |distance_to_tss=6067 | ||
| + | |end=136676670 | ||
|entrez_id=406913 | |entrez_id=406913 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=MIRN126|miRNA126|mir-126 | |gene_alias=MIRN126|miRNA126|mir-126 | ||
|gene_description=microRNA 126 | |gene_description=microRNA 126 | ||
| − | |gene_name= | + | |gene_id=10555 |
| + | |gene_name=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
| + | |gene_source=HGNC:325 | ||
| + | |gene_symbol=AGPAT2 | ||
| + | |gene_synonyms=LPAAT-beta | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:325 | ||
| + | |miRNA126= | ||
| + | |mir-126= | ||
|nearest_ensembl=ENSG00000199161 | |nearest_ensembl=ENSG00000199161 | ||
|nearest_promoter_id=NR_029695 | |nearest_promoter_id=NR_029695 | ||
|nearest_refseq=NR_029695 | |nearest_refseq=NR_029695 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=136676667 | ||
| + | |strand=- | ||
|tata_box="43(CCTTTTAAGAAG,+,0.00)" | |tata_box="43(CCTTTTAAGAAG,+,0.00)" | ||
| + | |transcript_name=BC007269 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103190.1 | |tss_id=hg_103190.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96IS9 | ||
}} | }} | ||
Revision as of 19:58, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC007269 |
|---|---|
| Distance: | -459 |
| Num_trans: | 1 |
| All_trans: | BC007269:-459 |
TATA-Box annotation
| Distance to TSS: | 6067 |
|---|---|
| Nearest PromoterID: | NR_029695 |
| Entrez ID: | 406913 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029695 |
| Nearest Ensembl: | ENSG00000199161 |
| Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Alias: | MIRN126 |
| Gene Description: | microRNA 126 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "43(CCTTTTAAGAAG,+,0.00)" |
