Difference between revisions of "TSS:Hg 103193.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=5 |entrez_id=10555 |gc_percent=0.80597 |gene_alias=1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta |gene_description=1-acylglycerol-3-phos...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BSCL= | ||
| + | |BSCL1= | ||
| + | |LPAAB= | ||
| + | |LPAAT-beta= | ||
| + | |all_trans=NM_001012727:0 NM_006412:0 ENST00000371696.6:2 uc004cii.2:2 AF000237:2 AF011374:8 BC000026:23 ENST00000371694.7:27 uc004cij.2:27 ENST00000538402.1:29 uc064xcw.1:29 U56418:29 BC019292:31 BC004529:32 ENST00000470861.1:60 uc064xcy.1:60 DQ892146:66 DQ895342:66 KJ906048:67 KJ898240:67 KJ902127:67 KR710265:67 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=5 | |distance_to_tss=5 | ||
| + | |end=136687483 | ||
|entrez_id=10555 | |entrez_id=10555 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
|gene_alias=1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta | |gene_alias=1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta | ||
|gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | |gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
| − | |gene_name=AGPAT2 | + | |gene_id=10555 |
| + | |gene_name=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
| + | |gene_source=HGNC:325 | ||
| + | |gene_symbol=AGPAT2 | ||
| + | |gene_synonyms=LPAAT-beta | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:325 | ||
|nearest_ensembl=ENSG00000169692 | |nearest_ensembl=ENSG00000169692 | ||
|nearest_promoter_id=NM_001012727 | |nearest_promoter_id=NM_001012727 | ||
|nearest_refseq=NM_006412 | |nearest_refseq=NM_006412 | ||
|nearest_unigene=Hs.320151 | |nearest_unigene=Hs.320151 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=136687424 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001012727 NM_006412 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103193.1 | |tss_id=hg_103193.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O15120 | ||
}} | }} | ||
Revision as of 19:58, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001012727 NM_006412 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | NM_001012727:0 NM_006412:0 ENST00000371696.6:2 uc004cii.2:2 AF000237:2 AF011374:8 BC000026:23 ENST00000371694.7:27 uc004cij.2:27 ENST00000538402.1:29 uc064xcw.1:29 U56418:29 BC019292:31 BC004529:32 ENST00000470861.1:60 uc064xcy.1:60 DQ892146:66 DQ895342:66 KJ906048:67 KJ898240:67 KJ902127:67 KR710265:67 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001012727 |
| Entrez ID: | 10555 |
| Nearest Unigene: | Hs.320151 |
| Nearest Refseq: | NM_006412 |
| Nearest Ensembl: | ENSG00000169692 |
| Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Alias: | 1-AGPAT2 |
| Gene Description: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
