Difference between revisions of "TSS:Hg 103217.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-6 |entrez_id=389812 |gc_percent=0.666667 |gene_alias=PRO6093|UNQ2541 |gene_description=lipocalin 15 |gene_name=LCN15 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |UNQ2541= | ||
| + | |all_trans=ENST00000316144.5:3 NM_203347:3 uc004cjd.3:3 AY358618:3 BC093893:8 BC093895:8 ENST00000495223.1:52 uc064xdv.1:52 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=3 | ||
|distance_to_tss=-6 | |distance_to_tss=-6 | ||
| + | |end=136764523 | ||
|entrez_id=389812 | |entrez_id=389812 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=PRO6093|UNQ2541 | |gene_alias=PRO6093|UNQ2541 | ||
|gene_description=lipocalin 15 | |gene_description=lipocalin 15 | ||
| − | |gene_name=LCN15 | + | |gene_id=389812 |
| + | |gene_name=lipocalin 15 | ||
| + | |gene_source=HGNC:33777 | ||
| + | |gene_symbol=LCN15 | ||
| + | |gene_synonyms=PRO6093 UNQ2541 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33777 | ||
|nearest_ensembl=ENSG00000177984 | |nearest_ensembl=ENSG00000177984 | ||
|nearest_promoter_id=NM_203347 | |nearest_promoter_id=NM_203347 | ||
|nearest_refseq=NM_203347 | |nearest_refseq=NM_203347 | ||
|nearest_unigene=Hs.413902 | |nearest_unigene=Hs.413902 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=136764515 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000316144.5 NM_203347 uc004cjd.3 AY358618 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103217.1 | |tss_id=hg_103217.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6UWW0 | ||
}} | }} | ||
Revision as of 19:59, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000316144.5 NM_203347 uc004cjd.3 AY358618 |
|---|---|
| Distance: | 3 |
| Num_trans: | 8 |
| All_trans: | ENST00000316144.5:3 NM_203347:3 uc004cjd.3:3 AY358618:3 BC093893:8 BC093895:8 ENST00000495223.1:52 uc064xdv.1:52 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_203347 |
| Entrez ID: | 389812 |
| Nearest Unigene: | Hs.413902 |
| Nearest Refseq: | NM_203347 |
| Nearest Ensembl: | ENSG00000177984 |
| Gene Name: | lipocalin 15 |
| Gene Alias: | PRO6093 |
| Gene Description: | lipocalin 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
