Difference between revisions of "TSS:Hg 10322.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=93 |entrez_id=4524 |gc_percent=0.636816 |gene_alias=- |gene_description=methylenetetrahydrofolate reductase |gene_name=MTHFR |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376583.7:65 uc057cho.1:65 AB209113:196 ENST00000376592.5:334 uc057chn.1:334 AJ237672:334 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=65 | ||
|distance_to_tss=93 | |distance_to_tss=93 | ||
| + | |end=11803589 | ||
|entrez_id=4524 | |entrez_id=4524 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=methylenetetrahydrofolate reductase | |gene_description=methylenetetrahydrofolate reductase | ||
| − | |gene_name=MTHFR | + | |gene_id=4524 |
| + | |gene_name=methylenetetrahydrofolate reductase (NAD(P)H) | ||
| + | |gene_source=HGNC:7436 | ||
| + | |gene_symbol=MTHFR | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7436 | ||
|nearest_ensembl=ENSG00000177000 | |nearest_ensembl=ENSG00000177000 | ||
|nearest_promoter_id=NM_001330358 | |nearest_promoter_id=NM_001330358 | ||
|nearest_refseq=NM_005957 | |nearest_refseq=NM_005957 | ||
|nearest_unigene=Hs.214142 | |nearest_unigene=Hs.214142 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=11803578 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376583.7 uc057cho.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10322.1 | |tss_id=hg_10322.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P42898 | ||
}} | }} | ||
Revision as of 20:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376583.7 uc057cho.1 |
|---|---|
| Distance: | 65 |
| Num_trans: | 6 |
| All_trans: | ENST00000376583.7:65 uc057cho.1:65 AB209113:196 ENST00000376592.5:334 uc057chn.1:334 AJ237672:334 |
TATA-Box annotation
| Distance to TSS: | 93 |
|---|---|
| Nearest PromoterID: | NM_001330358 |
| Entrez ID: | 4524 |
| Nearest Unigene: | Hs.214142 |
| Nearest Refseq: | NM_005957 |
| Nearest Ensembl: | ENSG00000177000 |
| Gene Name: | methylenetetrahydrofolate reductase (NAD(P)H) |
| Gene Alias: | - |
| Gene Description: | methylenetetrahydrofolate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
