Difference between revisions of "TSS:Hg 103243.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=49 |entrez_id=54461 |gc_percent=0.810945 |gene_alias=Fbw5 |gene_description=F-box and WD repeat domain containing 5 |gene_name=F...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000459905.5:1 uc064xfo.1:1 BC031100:1 ENST00000483559.5:9 uc064xfn.1:9 BC035355:9 ENST00000428398.5:10 uc064xfr.1:10 NM_018998:-40 ENST00000325285.7:47 uc004cjx.4:47 BC014130:47 AK315738:68 BC014297:76 ENST00000491246.4:77 uc064xfq.1:77 AK026081:79 ENST00000443788.1:163 uc064xfs.1:163 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=1 | ||
|distance_to_tss=49 | |distance_to_tss=49 | ||
| + | |end=136944714 | ||
|entrez_id=54461 | |entrez_id=54461 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=Fbw5 | |gene_alias=Fbw5 | ||
|gene_description=F-box and WD repeat domain containing 5 | |gene_description=F-box and WD repeat domain containing 5 | ||
| − | |gene_name=FBXW5 | + | |gene_id=54461 |
| + | |gene_name=F-box and WD repeat domain containing 5 | ||
| + | |gene_source=HGNC:13613 | ||
| + | |gene_symbol=FBXW5 | ||
| + | |gene_synonyms=DKFZP434B205 Fbw5 MGC20962 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13613 | ||
|nearest_ensembl=ENSG00000159069 | |nearest_ensembl=ENSG00000159069 | ||
|nearest_promoter_id=NM_018998 | |nearest_promoter_id=NM_018998 | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=136944696 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000459905.5 uc064xfo.1 BC031100 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103243.1 | |tss_id=hg_103243.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000459905.5 uc064xfo.1 BC031100 |
|---|---|
| Distance: | 1 |
| Num_trans: | 19 |
| All_trans: | ENST00000459905.5:1 uc064xfo.1:1 BC031100:1 ENST00000483559.5:9 uc064xfn.1:9 BC035355:9 ENST00000428398.5:10 uc064xfr.1:10 NM_018998:-40 ENST00000325285.7:47 uc004cjx.4:47 BC014130:47 AK315738:68 BC014297:76 ENST00000491246.4:77 uc064xfq.1:77 AK026081:79 ENST00000443788.1:163 uc064xfs.1:163 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
