Difference between revisions of "TSS:Hg 103246.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-31 |entrez_id=54461 |gc_percent=0.746269 |gene_alias=Fbw5 |gene_description=F-box and WD repeat domain containing 5 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_018998:28 ENST00000459905.5:86 uc064xfo.1:86 BC031100:86 ENST00000483559.5:94 uc064xfn.1:94 BC035355:94 ENST00000428398.5:95 uc064xfr.1:95 ENST00000325285.7:132 uc004cjx.4:132 BC014130:132 AK315738:153 BC014297:161 ENST00000491246.4:162 uc064xfq.1:162 AK026081:164 ENST00000443788.1:248 uc064xfs.1:248 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=28 | ||
|distance_to_tss=-31 | |distance_to_tss=-31 | ||
| + | |end=136944788 | ||
|entrez_id=54461 | |entrez_id=54461 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=Fbw5 | |gene_alias=Fbw5 | ||
|gene_description=F-box and WD repeat domain containing 5 | |gene_description=F-box and WD repeat domain containing 5 | ||
| − | |gene_name=FBXW5 | + | |gene_id=54461 |
| + | |gene_name=F-box and WD repeat domain containing 5 | ||
| + | |gene_source=HGNC:13613 | ||
| + | |gene_symbol=FBXW5 | ||
| + | |gene_synonyms=DKFZP434B205 Fbw5 MGC20962 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13613 | ||
|nearest_ensembl=ENSG00000159069 | |nearest_ensembl=ENSG00000159069 | ||
|nearest_promoter_id=NM_018998 | |nearest_promoter_id=NM_018998 | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=136944781 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_018998 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103246.1 | |tss_id=hg_103246.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q969U6 | ||
}} | }} | ||
Revision as of 20:01, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_018998 |
|---|---|
| Distance: | 28 |
| Num_trans: | 19 |
| All_trans: | NM_018998:28 ENST00000459905.5:86 uc064xfo.1:86 BC031100:86 ENST00000483559.5:94 uc064xfn.1:94 BC035355:94 ENST00000428398.5:95 uc064xfr.1:95 ENST00000325285.7:132 uc004cjx.4:132 BC014130:132 AK315738:153 BC014297:161 ENST00000491246.4:162 uc064xfq.1:162 AK026081:164 ENST00000443788.1:248 uc064xfs.1:248 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
