Difference between revisions of "TSS:Hg 103329.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-39 |entrez_id=8636 |gc_percent=0.706468 |gene_alias=N14|NA-14|NA14 |gene_description=SS nuclear autoantigen 1 |gene_name=SSNA1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NA-14= | ||
| + | |NA14= | ||
| + | |all_trans=ENST00000323927.2:0 ENST00000618649.1:0 uc004clr.2:0 uc064xkj.1:0 BC032503:0 AK294601:0 AF191337:0 KJ898735:0 DQ890852:0 DQ894007:0 AK296204:0 NM_013366:-11 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=-39 | |distance_to_tss=-39 | ||
| + | |end=137188594 | ||
|entrez_id=8636 | |entrez_id=8636 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=N14|NA-14|NA14 | |gene_alias=N14|NA-14|NA14 | ||
|gene_description=SS nuclear autoantigen 1 | |gene_description=SS nuclear autoantigen 1 | ||
| − | |gene_name= | + | |gene_id=29882 |
| + | |gene_name=anaphase promoting complex subunit 2 | ||
| + | |gene_source=HGNC:19989 | ||
| + | |gene_symbol=ANAPC2 | ||
| + | |gene_synonyms=APC2 KIAA1406 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19989 | ||
|nearest_ensembl=ENSG00000176101 | |nearest_ensembl=ENSG00000176101 | ||
|nearest_promoter_id=NM_003731 | |nearest_promoter_id=NM_003731 | ||
|nearest_refseq=NM_003731 | |nearest_refseq=NM_003731 | ||
|nearest_unigene=Hs.530314 | |nearest_unigene=Hs.530314 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=137188531 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000323927.2 ENST00000618649.1 uc004clr.2 uc064xkj.1 BC032503 AK294601 AF191337 KJ898735 DQ890852 DQ894007 AK296204 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103329.1 | |tss_id=hg_103329.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DGH7 B4DJR9 Q9UJX6 | ||
}} | }} | ||
Revision as of 20:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000323927.2 ENST00000618649.1 uc004clr.2 uc064xkj.1 BC032503 AK294601 AF191337 KJ898735 DQ890852 DQ894007 AK296204 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000323927.2:0 ENST00000618649.1:0 uc004clr.2:0 uc064xkj.1:0 BC032503:0 AK294601:0 AF191337:0 KJ898735:0 DQ890852:0 DQ894007:0 AK296204:0 NM_013366:-11 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_003731 |
| Entrez ID: | 8636 |
| Nearest Unigene: | Hs.530314 |
| Nearest Refseq: | NM_003731 |
| Nearest Ensembl: | ENSG00000176101 |
| Gene Name: | anaphase promoting complex subunit 2 |
| Gene Alias: | N14 |
| Gene Description: | SS nuclear autoantigen 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
