Difference between revisions of "TSS:Hg 103351.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=49 |entrez_id=401565 |gc_percent=0.61194 |gene_alias=HSD46 |gene_description=family with sequence similarity 166 member A |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000484720.1:0 uc064xkv.1:0 BC132916:0 BC132918:0 ENST00000471784.2:-14 ENST00000344774.5:-14 uc064xku.1:-14 uc004cmi.3:-14 AK097419:-14 AY604177:-14 KJ896256:15 HQ258370:16 NM_001001710:-36 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=49 | |distance_to_tss=49 | ||
| + | |end=137247756 | ||
|entrez_id=401565 | |entrez_id=401565 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=HSD46 | |gene_alias=HSD46 | ||
|gene_description=family with sequence similarity 166 member A | |gene_description=family with sequence similarity 166 member A | ||
| − | |gene_name=FAM166A | + | |gene_id=401565 |
| + | |gene_name=family with sequence similarity 166 member A | ||
| + | |gene_source=HGNC:33818 | ||
| + | |gene_symbol=FAM166A | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33818 | ||
|nearest_ensembl=ENSG00000188163 | |nearest_ensembl=ENSG00000188163 | ||
|nearest_promoter_id=NM_001001710 | |nearest_promoter_id=NM_001001710 | ||
|nearest_refseq=NM_001001710 | |nearest_refseq=NM_001001710 | ||
|nearest_unigene=Hs.522530 | |nearest_unigene=Hs.522530 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=137247729 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000484720.1 uc064xkv.1 BC132916 BC132918 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103351.1 | |tss_id=hg_103351.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JBW9 | ||
}} | }} | ||
Revision as of 20:05, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000484720.1 uc064xkv.1 BC132916 BC132918 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000484720.1:0 uc064xkv.1:0 BC132916:0 BC132918:0 ENST00000471784.2:-14 ENST00000344774.5:-14 uc064xku.1:-14 uc004cmi.3:-14 AK097419:-14 AY604177:-14 KJ896256:15 HQ258370:16 NM_001001710:-36 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_001001710 |
| Entrez ID: | 401565 |
| Nearest Unigene: | Hs.522530 |
| Nearest Refseq: | NM_001001710 |
| Nearest Ensembl: | ENSG00000188163 |
| Gene Name: | family with sequence similarity 166 member A |
| Gene Alias: | HSD46 |
| Gene Description: | family with sequence similarity 166 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
