Difference between revisions of "TSS:Hg 103379.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=1836 |entrez_id=26012 |gc_percent=0.696517 |gene_alias=HH9|NELF |gene_description=NMDA receptor synaptonuclear signaling and ne...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |NELF= | ||
| + | |all_trans=AK294320:0 ENST00000339554.7:-18 uc064xlm.1:-18 AK027474:-18 AK303703:20 AK316046:-132 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=1836 | |distance_to_tss=1836 | ||
| + | |end=137457519 | ||
|entrez_id=26012 | |entrez_id=26012 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=HH9|NELF | |gene_alias=HH9|NELF | ||
|gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | |gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | ||
| − | |gene_name=NSMF | + | |gene_id=26012 |
| + | |gene_name=NMDA receptor synaptonuclear signaling and neuronal migration factor | ||
| + | |gene_source=HGNC:29843 | ||
| + | |gene_symbol=NSMF | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29843 | ||
|nearest_ensembl=ENSG00000165802 | |nearest_ensembl=ENSG00000165802 | ||
|nearest_promoter_id=NM_001130971 | |nearest_promoter_id=NM_001130971 | ||
|nearest_refseq=NM_015537 | |nearest_refseq=NM_015537 | ||
|nearest_unigene=Hs.455336 | |nearest_unigene=Hs.455336 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=137457476 | ||
| + | |strand=- | ||
| + | |transcript_name=AK294320 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103379.1 | |tss_id=hg_103379.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DFY3 | ||
}} | }} | ||
Revision as of 20:06, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK294320 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | AK294320:0 ENST00000339554.7:-18 uc064xlm.1:-18 AK027474:-18 AK303703:20 AK316046:-132 |
TATA-Box annotation
| Distance to TSS: | 1836 |
|---|---|
| Nearest PromoterID: | NM_001130971 |
| Entrez ID: | 26012 |
| Nearest Unigene: | Hs.455336 |
| Nearest Refseq: | NM_015537 |
| Nearest Ensembl: | ENSG00000165802 |
| Gene Name: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Alias: | HH9 |
| Gene Description: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
