Difference between revisions of "TSS:Hg 103384.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=136 |entrez_id=375775 |gc_percent=0.567164 |gene_alias=C9orf111|NTE-R1|NTEL1 |gene_description=patatin like phospholipase domain...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NTE-R1= | ||
| + | |NTEL1= | ||
| + | |all_trans=ENST00000277531.8:32 ENST00000434090.2:32 uc004cnf.3:32 uc064xlw.1:32 AK125060:32 AK126267:32 ENST00000406427.5:-83 uc010ncj.1:-83 NM_001098537:-118 NM_152286:-118 BC167848:217 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=32 | ||
|distance_to_tss=136 | |distance_to_tss=136 | ||
| + | |end=137550451 | ||
|entrez_id=375775 | |entrez_id=375775 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=C9orf111|NTE-R1|NTEL1 | |gene_alias=C9orf111|NTE-R1|NTEL1 | ||
|gene_description=patatin like phospholipase domain containing 7 | |gene_description=patatin like phospholipase domain containing 7 | ||
| − | |gene_name=PNPLA7 | + | |gene_id=375775 |
| + | |gene_name=patatin like phospholipase domain containing 7 | ||
| + | |gene_source=HGNC:24768 | ||
| + | |gene_symbol=PNPLA7 | ||
| + | |gene_synonyms=FLJ31318 FLJ43070 FLJ44279 NTE-R1 NTEL1 RP11-48C7.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24768 | ||
|nearest_ensembl=ENSG00000130653 | |nearest_ensembl=ENSG00000130653 | ||
|nearest_promoter_id=NM_001098537 | |nearest_promoter_id=NM_001098537 | ||
|nearest_refseq=NM_152286 | |nearest_refseq=NM_152286 | ||
|nearest_unigene=Hs.294147 | |nearest_unigene=Hs.294147 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=137550415 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000277531.8 ENST00000434090.2 uc004cnf.3 uc064xlw.1 AK125060 AK126267 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103384.1 | |tss_id=hg_103384.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZV29 | ||
}} | }} | ||
Revision as of 20:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000277531.8 ENST00000434090.2 uc004cnf.3 uc064xlw.1 AK125060 AK126267 |
|---|---|
| Distance: | 32 |
| Num_trans: | 11 |
| All_trans: | ENST00000277531.8:32 ENST00000434090.2:32 uc004cnf.3:32 uc064xlw.1:32 AK125060:32 AK126267:32 ENST00000406427.5:-83 uc010ncj.1:-83 NM_001098537:-118 NM_152286:-118 BC167848:217 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NM_001098537 |
| Entrez ID: | 375775 |
| Nearest Unigene: | Hs.294147 |
| Nearest Refseq: | NM_152286 |
| Nearest Ensembl: | ENSG00000130653 |
| Gene Name: | patatin like phospholipase domain containing 7 |
| Gene Alias: | C9orf111 |
| Gene Description: | patatin like phospholipase domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
