Difference between revisions of "TSS:Hg 103392.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=126 |entrez_id=85026 |gc_percent=0.646766 |gene_alias=C9orf37 |gene_description=ARRDC1 antisense RNA 1 |gene_name=ARRDC1-AS1 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC011781:-23 ENST00000371417.3:-39 uc064xmx.1:-39 AF267857:-39 ENST00000623970.1:-57 uc064xmy.1:-57 NR_122035:-121 ENST00000496793.1:-132 uc064xmz.1:-132 BC066646:162 NR_122036:235 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=-23 | ||
|distance_to_tss=126 | |distance_to_tss=126 | ||
| + | |end=137618774 | ||
|entrez_id=85026 | |entrez_id=85026 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=C9orf37 | |gene_alias=C9orf37 | ||
|gene_description=ARRDC1 antisense RNA 1 | |gene_description=ARRDC1 antisense RNA 1 | ||
| − | |gene_name=ARRDC1-AS1 | + | |gene_id=85026 |
| + | |gene_name=ARRDC1 antisense RNA 1 | ||
| + | |gene_source=HGNC:23395 | ||
| + | |gene_symbol=ARRDC1-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:23395 | ||
|nearest_ensembl=ENSG00000203993 | |nearest_ensembl=ENSG00000203993 | ||
|nearest_promoter_id=NR_122035 | |nearest_promoter_id=NR_122035 | ||
|nearest_refseq=NM_032937 | |nearest_refseq=NM_032937 | ||
|nearest_unigene=Hs.522520 | |nearest_unigene=Hs.522520 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=137618763 | ||
| + | |strand=- | ||
| + | |transcript_name=BC011781 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103392.1 | |tss_id=hg_103392.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC011781 |
|---|---|
| Distance: | -23 |
| Num_trans: | 11 |
| All_trans: | BC011781:-23 ENST00000371417.3:-39 uc064xmx.1:-39 AF267857:-39 ENST00000623970.1:-57 uc064xmy.1:-57 NR_122035:-121 ENST00000496793.1:-132 uc064xmz.1:-132 BC066646:162 NR_122036:235 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NR_122035 |
| Entrez ID: | 85026 |
| Nearest Unigene: | Hs.522520 |
| Nearest Refseq: | NM_032937 |
| Nearest Ensembl: | ENSG00000203993 |
| Gene Name: | ARRDC1 antisense RNA 1 |
| Gene Alias: | C9orf37 |
| Gene Description: | ARRDC1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
