Difference between revisions of "TSS:Hg 10340.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-354 |entrez_id=4878 |gc_percent=0.562189 |gene_alias=ANF|ANP|ATFB6|ATRST2|CDD|CDD-ANF|CDP|PND |gene_description=natriuretic pe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ANP= | ||
| + | |ATFB6= | ||
| + | |ATRST2= | ||
| + | |CDD= | ||
| + | |CDD-ANF= | ||
| + | |CDP= | ||
| + | |PND= | ||
| + | |all_trans=ENST00000376476.1:-200 uc057cig.1:-200 ENST00000376480.7:346 ENST00000610706.1:346 NM_006172:346 uc001ati.4:346 uc057cif.1:346 BC005893:346 M30262:351 DQ893115:440 DQ896389:440 EU176780:440 KJ897262:443 KR710208:443 AB528342:444 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-200 | ||
|distance_to_tss=-354 | |distance_to_tss=-354 | ||
| + | |end=11848145 | ||
|entrez_id=4878 | |entrez_id=4878 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=ANF|ANP|ATFB6|ATRST2|CDD|CDD-ANF|CDP|PND | |gene_alias=ANF|ANP|ATFB6|ATRST2|CDD|CDD-ANF|CDP|PND | ||
|gene_description=natriuretic peptide A | |gene_description=natriuretic peptide A | ||
| − | |gene_name=NPPA | + | |gene_id=4878 |
| + | |gene_name=natriuretic peptide A | ||
| + | |gene_source=HGNC:7939 | ||
| + | |gene_symbol=NPPA | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7939 | ||
|nearest_ensembl=ENSG00000175206 | |nearest_ensembl=ENSG00000175206 | ||
|nearest_promoter_id=NM_006172 | |nearest_promoter_id=NM_006172 | ||
|nearest_refseq=NM_006172 | |nearest_refseq=NM_006172 | ||
|nearest_unigene=Hs.75640 | |nearest_unigene=Hs.75640 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=11848128 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376476.1 uc057cig.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10340.1 | |tss_id=hg_10340.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B0ZBE8 | ||
}} | }} | ||
Revision as of 20:07, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376476.1 uc057cig.1 |
|---|---|
| Distance: | -200 |
| Num_trans: | 15 |
| All_trans: | ENST00000376476.1:-200 uc057cig.1:-200 ENST00000376480.7:346 ENST00000610706.1:346 NM_006172:346 uc001ati.4:346 uc057cif.1:346 BC005893:346 M30262:351 DQ893115:440 DQ896389:440 EU176780:440 KJ897262:443 KR710208:443 AB528342:444 |
TATA-Box annotation
| Distance to TSS: | -354 |
|---|---|
| Nearest PromoterID: | NM_006172 |
| Entrez ID: | 4878 |
| Nearest Unigene: | Hs.75640 |
| Nearest Refseq: | NM_006172 |
| Nearest Ensembl: | ENSG00000175206 |
| Gene Name: | natriuretic peptide A |
| Gene Alias: | ANF |
| Gene Description: | natriuretic peptide A |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
