Difference between revisions of "TSS:Hg 103405.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=-428 |entrez_id=10771 |gc_percent=0.78607 |gene_alias=BRAM1|BS69|MRD30 |gene_description=zinc finger MYND-type containing 11 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BS69= | ||
| + | |MRD30= | ||
| + | |all_trans=ENST00000381591.5:5 uc057rdi.1:5 AK294469:-246 AK294781:-246 AK312570:-320 ENST00000509513.6:-345 uc001ifk.4:-345 BC034784:-345 ENST00000403354.5:420 ENST00000381607.8:420 NM_001202464:420 uc057rdj.1:420 uc001ifm.4:420 BC091489:420 ENST00000402736.5:445 uc057rdk.1:445 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| + | |distance=5 | ||
|distance_to_tss=-428 | |distance_to_tss=-428 | ||
| + | |end=135064 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=BRAM1|BS69|MRD30 | |gene_alias=BRAM1|BS69|MRD30 | ||
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
| − | |gene_name=ZMYND11 | + | |gene_id=10771 |
| + | |gene_name=zinc finger MYND-type containing 11 | ||
| + | |gene_source=HGNC:16966 | ||
| + | |gene_symbol=ZMYND11 | ||
| + | |gene_synonyms=BS69 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
|nearest_promoter_id=NM_001202464 | |nearest_promoter_id=NM_001202464 | ||
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=135047 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000381591.5 uc057rdi.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103405.1 | |tss_id=hg_103405.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q15326 | ||
}} | }} | ||
Revision as of 20:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000381591.5 uc057rdi.1 |
|---|---|
| Distance: | 5 |
| Num_trans: | 16 |
| All_trans: | ENST00000381591.5:5 uc057rdi.1:5 AK294469:-246 AK294781:-246 AK312570:-320 ENST00000509513.6:-345 uc001ifk.4:-345 BC034784:-345 ENST00000403354.5:420 ENST00000381607.8:420 NM_001202464:420 uc057rdj.1:420 uc001ifm.4:420 BC091489:420 ENST00000402736.5:445 uc057rdk.1:445 |
TATA-Box annotation
| Distance to TSS: | -428 |
|---|---|
| Nearest PromoterID: | NM_001202464 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
