Difference between revisions of "TSS:Hg 103407.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=-30 |entrez_id=10771 |gc_percent=0.850746 |gene_alias=BRAM1|BS69|MRD30 |gene_description=zinc finger MYND-type containing 11 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BS69= | ||
| + | |MRD30= | ||
| + | |all_trans=ENST00000403354.5:7 ENST00000381607.8:7 NM_001202464:7 uc057rdj.1:7 uc001ifm.4:7 BC091489:7 ENST00000402736.5:32 uc057rdk.1:32 ENST00000381591.5:-362 uc057rdi.1:-362 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=7 | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
| + | |end=135477 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
|gene_alias=BRAM1|BS69|MRD30 | |gene_alias=BRAM1|BS69|MRD30 | ||
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
| − | |gene_name=ZMYND11 | + | |gene_id=10771 |
| + | |gene_name=zinc finger MYND-type containing 11 | ||
| + | |gene_source=HGNC:16966 | ||
| + | |gene_symbol=ZMYND11 | ||
| + | |gene_synonyms=BS69 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
|nearest_promoter_id=NM_001202464 | |nearest_promoter_id=NM_001202464 | ||
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=135430 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000403354.5 ENST00000381607.8 NM_001202464 uc057rdj.1 uc001ifm.4 BC091489 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103407.1 | |tss_id=hg_103407.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B0QZE2 Q15326 Q5BJG6 Q5UGI2 | ||
}} | }} | ||
Revision as of 20:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000403354.5 ENST00000381607.8 NM_001202464 uc057rdj.1 uc001ifm.4 BC091489 |
|---|---|
| Distance: | 7 |
| Num_trans: | 10 |
| All_trans: | ENST00000403354.5:7 ENST00000381607.8:7 NM_001202464:7 uc057rdj.1:7 uc001ifm.4:7 BC091489:7 ENST00000402736.5:32 uc057rdk.1:32 ENST00000381591.5:-362 uc057rdi.1:-362 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_001202464 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
