Difference between revisions of "TSS:Hg 103421.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=13176 |entrez_id=100847086 |gc_percent=0.626866 |gene_alias=mir-5699 |gene_description=microRNA 5699 |gene_name=MIR5699 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000451601.1:14 uc057rdz.1:14 BC031269:14 AK090669:15 BC045781:45 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=14 | ||
|distance_to_tss=13176 | |distance_to_tss=13176 | ||
| + | |end=628624 | ||
|entrez_id=100847086 | |entrez_id=100847086 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=mir-5699 | |gene_alias=mir-5699 | ||
|gene_description=microRNA 5699 | |gene_description=microRNA 5699 | ||
| − | |gene_name= | + | |gene_id=101930421 |
| + | |gene_name=uncharacterized LOC101930421 | ||
| + | |gene_source=EntrezGene:101930421 | ||
| + | |gene_symbol=LOC101930421 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000263511 | |nearest_ensembl=ENSG00000263511 | ||
|nearest_promoter_id=NR_049884 | |nearest_promoter_id=NR_049884 | ||
|nearest_refseq=NR_049884 | |nearest_refseq=NR_049884 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=628579 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000451601.1 uc057rdz.1 BC031269 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103421.1 | |tss_id=hg_103421.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000451601.1 uc057rdz.1 BC031269 |
|---|---|
| Distance: | 14 |
| Num_trans: | 5 |
| All_trans: | ENST00000451601.1:14 uc057rdz.1:14 BC031269:14 AK090669:15 BC045781:45 |
TATA-Box annotation
| Distance to TSS: | 13176 |
|---|---|
| Nearest PromoterID: | NR_049884 |
| Entrez ID: | 100847086 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_049884 |
| Nearest Ensembl: | ENSG00000263511 |
| Gene Name: | uncharacterized LOC101930421 |
| Gene Alias: | mir-5699 |
| Gene Description: | microRNA 5699 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
