Difference between revisions of "TSS:Hg 103430.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=305 |entrez_id=23560 |gc_percent=0.666667 |gene_alias=CRFG|NGB|NOG1 |gene_description=GTP binding protein 4 |gene_name=GTPBP4 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NGB= | ||
| + | |NOG1= | ||
| + | |all_trans=AK301721:0 ENST00000360059.5:-2 uc057res.1:-2 AK302219:-207 BC033784:-209 AF325353:-228 KJ898511:-231 ENST00000491635.1:-246 uc057rer.1:-246 AK097093:-246 AK295231:-246 AK001548:-246 AK222861:-246 BC038975:-249 AF120334:-251 BC021243:-258 BC008683:-261 NM_012341:-299 AK001552:-299 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=0 | ||
|distance_to_tss=305 | |distance_to_tss=305 | ||
| + | |end=988720 | ||
|entrez_id=23560 | |entrez_id=23560 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=CRFG|NGB|NOG1 | |gene_alias=CRFG|NGB|NOG1 | ||
|gene_description=GTP binding protein 4 | |gene_description=GTP binding protein 4 | ||
| − | |gene_name=GTPBP4 | + | |gene_id=23560 |
| + | |gene_name=GTP binding protein 4 | ||
| + | |gene_source=HGNC:21535 | ||
| + | |gene_symbol=GTPBP4 | ||
| + | |gene_synonyms=CRFG FLJ10686 FLJ10690 NGB NOG1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:21535 | ||
|nearest_ensembl=ENSG00000107937 | |nearest_ensembl=ENSG00000107937 | ||
|nearest_promoter_id=NM_012341 | |nearest_promoter_id=NM_012341 | ||
|nearest_refseq=NM_012341 | |nearest_refseq=NM_012341 | ||
|nearest_unigene=Hs.215766 | |nearest_unigene=Hs.215766 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=988707 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK301721 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103430.1 | |tss_id=hg_103430.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK301721 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | AK301721:0 ENST00000360059.5:-2 uc057res.1:-2 AK302219:-207 BC033784:-209 AF325353:-228 KJ898511:-231 ENST00000491635.1:-246 uc057rer.1:-246 AK097093:-246 AK295231:-246 AK001548:-246 AK222861:-246 BC038975:-249 AF120334:-251 BC021243:-258 BC008683:-261 NM_012341:-299 AK001552:-299 |
TATA-Box annotation
| Distance to TSS: | 305 |
|---|---|
| Nearest PromoterID: | NM_012341 |
| Entrez ID: | 23560 |
| Nearest Unigene: | Hs.215766 |
| Nearest Refseq: | NM_012341 |
| Nearest Ensembl: | ENSG00000107937 |
| Gene Name: | GTP binding protein 4 |
| Gene Alias: | CRFG |
| Gene Description: | GTP binding protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
