Difference between revisions of "TSS:Hg 103437.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=315 |entrez_id=3422 |gc_percent=0.686567 |gene_alias=IPP1|IPPI1 |gene_description=isopentenyl-diphosphate delta isomerase 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |IPPI1= | ||
| + | |all_trans=ENST00000620998.4:0 ENST00000381329.5:0 uc057rfb.1:0 uc001ige.3:0 BC018044:0 NM_014023:397 AK307259:407 ENST00000263150.8:419 uc001igf.2:419 AL136827:419 AK292591:434 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=315 | |distance_to_tss=315 | ||
| + | |end=1056439 | ||
|entrez_id=3422 | |entrez_id=3422 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=IPP1|IPPI1 | |gene_alias=IPP1|IPPI1 | ||
|gene_description=isopentenyl-diphosphate delta isomerase 1 | |gene_description=isopentenyl-diphosphate delta isomerase 1 | ||
| − | |gene_name= | + | |gene_id=22884 |
| + | |gene_name=WD repeat domain 37 | ||
| + | |gene_source=HGNC:31406 | ||
| + | |gene_symbol=WDR37 | ||
| + | |gene_synonyms=KIAA0982 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31406 | ||
|nearest_ensembl=ENSG00000067064 | |nearest_ensembl=ENSG00000067064 | ||
|nearest_promoter_id=NM_001317955 | |nearest_promoter_id=NM_001317955 | ||
|nearest_refseq=NM_004508 | |nearest_refseq=NM_004508 | ||
|nearest_unigene=Hs.283652 | |nearest_unigene=Hs.283652 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=1056363 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000620998.4 ENST00000381329.5 uc057rfb.1 uc001ige.3 BC018044 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103437.1 | |tss_id=hg_103437.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WTQ2 E7EQ49 | ||
}} | }} | ||
Revision as of 20:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000620998.4 ENST00000381329.5 uc057rfb.1 uc001ige.3 BC018044 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000620998.4:0 ENST00000381329.5:0 uc057rfb.1:0 uc001ige.3:0 BC018044:0 NM_014023:397 AK307259:407 ENST00000263150.8:419 uc001igf.2:419 AL136827:419 AK292591:434 |
TATA-Box annotation
| Distance to TSS: | 315 |
|---|---|
| Nearest PromoterID: | NM_001317955 |
| Entrez ID: | 3422 |
| Nearest Unigene: | Hs.283652 |
| Nearest Refseq: | NM_004508 |
| Nearest Ensembl: | ENSG00000067064 |
| Gene Name: | WD repeat domain 37 |
| Gene Alias: | IPP1 |
| Gene Description: | isopentenyl-diphosphate delta isomerase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
