Difference between revisions of "TSS:Hg 103445.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=15 |entrez_id=642394 |gc_percent=0.61194 |gene_alias=C10orf109|NCRNA00168|bA466B20.1 |gene_description=ADARB2 antisense RNA 1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00168= | ||
| + | |all_trans=ENST00000421697.2:-4 uc057rfl.1:-4 NR_033387:-11 AF086274:-11 ENST00000381301.3:113 uc057rfm.1:113 | ||
| + | |bA466B20.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-4 | ||
|distance_to_tss=15 | |distance_to_tss=15 | ||
| + | |end=1526650 | ||
|entrez_id=642394 | |entrez_id=642394 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
|gene_alias=C10orf109|NCRNA00168|bA466B20.1 | |gene_alias=C10orf109|NCRNA00168|bA466B20.1 | ||
|gene_description=ADARB2 antisense RNA 1 | |gene_description=ADARB2 antisense RNA 1 | ||
| − | |gene_name=ADARB2-AS1 | + | |gene_id=642394 |
| + | |gene_name=ADARB2 antisense RNA 1 | ||
| + | |gene_source=HGNC:23299 | ||
| + | |gene_symbol=ADARB2-AS1 | ||
| + | |gene_synonyms=bA466B20.1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:23299 | ||
|nearest_ensembl=ENSG00000205696 | |nearest_ensembl=ENSG00000205696 | ||
|nearest_promoter_id=NR_033387 | |nearest_promoter_id=NR_033387 | ||
|nearest_refseq=NM_001098830 | |nearest_refseq=NM_001098830 | ||
|nearest_unigene=Hs.568831 | |nearest_unigene=Hs.568831 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=1526640 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000421697.2 uc057rfl.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103445.1 | |tss_id=hg_103445.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000421697.2 uc057rfl.1 |
|---|---|
| Distance: | -4 |
| Num_trans: | 6 |
| All_trans: | ENST00000421697.2:-4 uc057rfl.1:-4 NR_033387:-11 AF086274:-11 ENST00000381301.3:113 uc057rfm.1:113 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NR_033387 |
| Entrez ID: | 642394 |
| Nearest Unigene: | Hs.568831 |
| Nearest Refseq: | NM_001098830 |
| Nearest Ensembl: | ENSG00000205696 |
| Gene Name: | ADARB2 antisense RNA 1 |
| Gene Alias: | C10orf109 |
| Gene Description: | ADARB2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
