Difference between revisions of "TSS:Hg 10345.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-51 |entrez_id=4879 |gc_percent=0.646766 |gene_alias=BNP |gene_description=natriuretic peptide B |gene_name=NPPB |gene_type=prot...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_002521:36 ENST00000376468.3:40 uc001atj.4:40 M25296:40 BC025785:49 KJ891714:137 CR541976:138 CR542003:138 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=36 | ||
|distance_to_tss=-51 | |distance_to_tss=-51 | ||
| + | |end=11859001 | ||
|entrez_id=4879 | |entrez_id=4879 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=BNP | |gene_alias=BNP | ||
|gene_description=natriuretic peptide B | |gene_description=natriuretic peptide B | ||
| − | |gene_name=NPPB | + | |gene_id=4879 |
| + | |gene_name=natriuretic peptide B | ||
| + | |gene_source=HGNC:7940 | ||
| + | |gene_symbol=NPPB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7940 | ||
|nearest_ensembl=ENSG00000120937 | |nearest_ensembl=ENSG00000120937 | ||
|nearest_promoter_id=NM_002521 | |nearest_promoter_id=NM_002521 | ||
|nearest_refseq=NM_002521 | |nearest_refseq=NM_002521 | ||
|nearest_unigene=Hs.219140 | |nearest_unigene=Hs.219140 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=11858970 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_002521 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10345.1 | |tss_id=hg_10345.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P16860 | ||
}} | }} | ||
Revision as of 20:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_002521 |
|---|---|
| Distance: | 36 |
| Num_trans: | 8 |
| All_trans: | NM_002521:36 ENST00000376468.3:40 uc001atj.4:40 M25296:40 BC025785:49 KJ891714:137 CR541976:138 CR542003:138 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NM_002521 |
| Entrez ID: | 4879 |
| Nearest Unigene: | Hs.219140 |
| Nearest Refseq: | NM_002521 |
| Nearest Ensembl: | ENSG00000120937 |
| Gene Name: | natriuretic peptide B |
| Gene Alias: | BNP |
| Gene Description: | natriuretic peptide B |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
