Difference between revisions of "TSS:Hg 10349.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=13 |entrez_id=90231 |gc_percent=0.711443 |gene_alias=- |gene_description=KIAA2013 |gene_name=KIAA2013 |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000376572.7:0 ENST00000616327.1:0 ENST00000376576.3:0 NM_138346:0 uc001atk.4:0 uc057cij.1:0 uc001atl.2:0 BC035033:0 AB095933:0 KJ899897:149 AB384349:149 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=0 | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
| + | |end=11926445 | ||
|entrez_id=90231 | |entrez_id=90231 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=KIAA2013 | |gene_description=KIAA2013 | ||
| + | |gene_id=102724984 90231 | ||
|gene_name=KIAA2013 | |gene_name=KIAA2013 | ||
| + | |gene_source=HGNC:28513 | ||
| + | |gene_symbol=KIAA2013 | ||
| + | |gene_synonyms=MGC33867 RP5-1077B9.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28513 | ||
|nearest_ensembl=ENSG00000116685 | |nearest_ensembl=ENSG00000116685 | ||
|nearest_promoter_id=NM_138346 | |nearest_promoter_id=NM_138346 | ||
|nearest_refseq=NM_138346 | |nearest_refseq=NM_138346 | ||
|nearest_unigene=Hs.520094 | |nearest_unigene=Hs.520094 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=11926385 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376572.7 ENST00000616327.1 ENST00000376576.3 NM_138346 uc001atk.4 uc057cij.1 uc001atl.2 BC035033 AB095933 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10349.1 | |tss_id=hg_10349.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IYS2 | ||
}} | }} | ||
Revision as of 20:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376572.7 ENST00000616327.1 ENST00000376576.3 NM_138346 uc001atk.4 uc057cij.1 uc001atl.2 BC035033 AB095933 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000376572.7:0 ENST00000616327.1:0 ENST00000376576.3:0 NM_138346:0 uc001atk.4:0 uc057cij.1:0 uc001atl.2:0 BC035033:0 AB095933:0 KJ899897:149 AB384349:149 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_138346 |
| Entrez ID: | 90231 |
| Nearest Unigene: | Hs.520094 |
| Nearest Refseq: | NM_138346 |
| Nearest Ensembl: | ENSG00000116685 |
| Gene Name: | KIAA2013 |
| Gene Alias: | - |
| Gene Description: | KIAA2013 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
