Difference between revisions of "TSS:Hg 103571.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-491 |entrez_id=101927964 |gc_percent=0.452736 |gene_alias=- |gene_description=uncharacterized LOC101927964 |gene_name=LOC101927...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000455199.1:467 NR_120632:467 uc001ihc.1:467 AK055803:467 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=467 | ||
|distance_to_tss=-491 | |distance_to_tss=-491 | ||
| + | |end=4051259 | ||
|entrez_id=101927964 | |entrez_id=101927964 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101927964 | |gene_description=uncharacterized LOC101927964 | ||
| − | |gene_name=LOC101927964 | + | |gene_id=101927964 |
| + | |gene_name=uncharacterized LOC101927964 | ||
| + | |gene_source=EntrezGene:101927964 | ||
| + | |gene_symbol=LOC101927964 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000236990 | |nearest_ensembl=ENSG00000236990 | ||
|nearest_promoter_id=NR_120632 | |nearest_promoter_id=NR_120632 | ||
|nearest_refseq=NR_120632 | |nearest_refseq=NR_120632 | ||
|nearest_unigene=Hs.737041 | |nearest_unigene=Hs.737041 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=4051210 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000455199.1 NR_120632 uc001ihc.1 AK055803 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103571.1 | |tss_id=hg_103571.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000455199.1 NR_120632 uc001ihc.1 AK055803 |
|---|---|
| Distance: | 467 |
| Num_trans: | 4 |
| All_trans: | ENST00000455199.1:467 NR_120632:467 uc001ihc.1:467 AK055803:467 |
TATA-Box annotation
| Distance to TSS: | -491 |
|---|---|
| Nearest PromoterID: | NR_120632 |
| Entrez ID: | 101927964 |
| Nearest Unigene: | Hs.737041 |
| Nearest Refseq: | NR_120632 |
| Nearest Ensembl: | ENSG00000236990 |
| Gene Name: | uncharacterized LOC101927964 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927964 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
